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    WRKY47 WRKY family transcription factor [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828001, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY47
    Official Full Name
    WRKY family transcription factor
    Primary source
    TAIR:AT4G01720
    Locus tag
    AT4G01720
    See related
    Araport:AT4G01720
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtWRKY47; T15B16.12; T15B16_12
    Summary
    member of WRKY Transcription Factor; Group II-b
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    Genomic context

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    See WRKY47 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    6
    Sequence:
    Chromosome: 4; NC_003075.7 (744804..748554)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ARP2/3 complex 16 kDa subunit (p16-Arc) Neighboring gene DHHC-type zinc finger family protein Neighboring gene polyhomeotic-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. WRKY47 transcription factor modulates leaf senescence through regulating PCD-associated genes in Arabidopsis. Cui X, et al. Plant Physiol Biochem, 2024 Aug. PMID 38861819
    2. Repression of transcription factor AtWRKY47 confers tolerance to boron toxicity in Arabidopsis thaliana. Feng Y, et al. Ecotoxicol Environ Saf, 2021 Sep 1. PMID 34119927
    3. A WRKY transcription factor confers aluminum tolerance via regulation of cell wall modifying genes. Li CX, et al. J Integr Plant Biol, 2020 Aug. PMID 31729146
    4. Unequally redundant RCD1 and SRO1 mediate stress and developmental responses and interact with transcription factors. Jaspers P, et al. Plant J, 2009 Oct. PMID 19548978
    5. The WRKY superfamily of plant transcription factors. Eulgem T, et al. Trends Plant Sci, 2000 May. PMID 10785665

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. WRKY47 transcription factor modulates leaf senescence through regulating PCD-associated genes in Arabidopsis.
      Title: WRKY47 transcription factor modulates leaf senescence through regulating PCD-associated genes in Arabidopsis.
    2. Repression of transcription factor AtWRKY47 confers tolerance to boron toxicity in Arabidopsis thaliana.
      Title: Repression of transcription factor AtWRKY47 confers tolerance to boron toxicity in Arabidopsis thaliana.
    3. A WRKY transcription factor confers aluminum tolerance via regulation of cell wall modifying genes.
      Title: A WRKY transcription factor confers aluminum tolerance via regulation of cell wall modifying genes.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_116402.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY family transcription factor
    NP_192081.1
    • WRKY47; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3605 Blast hits to 3148 proteins in 215 species: Archae - 2; Bacteria - 4; Metazoa - 47; Fungi - 10; Plants - 3482; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      744804..748554
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116402.4 → NP_192081.1  WRKY family transcription factor [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192081.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M116, Q9ZSI7
      UniProtKB/TrEMBL
      A0A178UW82, A0A5S9XPC5, A0A654FL03, Q0WNC3
      Conserved Domains (1) summary
      smart00774
      Location:238 → 296
      WRKY; DNA binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZSI7.2

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