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    CRK11 cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828418, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRK11
    Official Full Name
    cysteine-rich RLK (RECEPTOR-like protein kinase) 11
    Primary source
    TAIR:AT4G23190
    Locus tag
    AT4G23190
    See related
    Araport:AT4G23190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AT-RLK3; cysteine-rich RLK (RECEPTOR-like protein kinase) 11; F21P8.80; F21P8_80; RECEPTOR LIKE PROTEIN KINASE 3
    Summary
    Encodes putative receptor-like protein kinase that is induced by the soil-borne vascular bacteria, Ralstonia solanacearum. Naming convention from Chen et al 2003 (PMID 14756307)
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    Genomic context

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    See CRK11 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (12140899..12143858, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene cysteine-rich RECEPTOR-like kinase Neighboring gene receptor-like protein kinase-related family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 10 Neighboring gene ncRNA Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of an Arabidopsis thaliana receptor-like protein kinase gene activated by oxidative stress and pathogen attack. Czernic P, et al. Plant J, 1999 May. PMID 10377997
    2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001341581.1
    NM_001341582.1
    NM_001341583.1
    NM_118448.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to oxidative stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cysteine-rich RLK (RECEPTOR-like protein kinase) 11
    NP_194050.2
    • cysteine-rich RLK (RECEPTOR-like protein kinase) 11 (CRK11); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 22 (TAIR:AT4G23300.1); Has 122786 Blast hits to 121167 proteins in 4390 species: Archae - 103; Bacteria - 13685; Metazoa - 45057; Fungi - 10628; Plants - 34657; Viruses - 456; Other Eukaryotes - 18200 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12140899..12143858 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118448.4 → NP_194050.2  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194050.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65471, Q9ZP16
      UniProtKB/TrEMBL
      A0A178UYL6
      Conserved Domains (3) summary
      smart00219
      Location:355 → 624
      TyrKc; Tyrosine kinase, catalytic domain
      cd14066
      Location:356 → 625
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam01657
      Location:26 → 125
      Stress-antifung; Salt stress response/antifungal

    2. NM_001341581.1 → NP_001329689.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYL6, A0A1P8B8G3

    3. NM_001341582.1 → NP_001329690.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYL6, A0A1P8B8H5

    4. NM_001341583.1 → NP_001329691.1  cysteine-rich RLK (RECEPTOR-like protein kinase) 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYL6, A0A1P8B8H5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZP16.2

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