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    G3Pp2 root hair specific 15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828625, updated on 18-Sep-2024

    Summary

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    Official Symbol
    G3Pp2
    Official Full Name
    root hair specific 15
    Primary source
    TAIR:AT4G25220
    Locus tag
    AT4G25220
    See related
    Araport:AT4G25220
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtG3Pp2; F24A6.60; F24A6_60; glycerol-3-phosphate permease 2; RHS15; root hair specific 15
    Summary
    Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).
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    Genomic context

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    See G3Pp2 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Sequence:
    Chromosome: 4; NC_003075.7 (12920742..12922885)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene mitochondrion-localized small heat shock protein 23.6 Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator Neighboring gene uncharacterized protein Neighboring gene RPM1 interacting protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of the phosphate starvation-induced glycerol-3-phosphate permease gene family in Arabidopsis. Ramaiah M, et al. Plant Physiol, 2011 Sep. PMID 21788361, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118654.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within phosphate ion homeostasis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    root hair specific 15
    NP_194252.1
    • root hair specific 15 (RHS15); FUNCTIONS IN: transporter activity; INVOLVED IN: transport, transmembrane transport; EXPRESSED IN: root hair, root; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G30560.1); Has 24096 Blast hits to 23877 proteins in 2274 species: Archae - 433; Bacteria - 19651; Metazoa - 1044; Fungi - 1491; Plants - 385; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12920742..12922885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118654.4 → NP_194252.1  root hair specific 15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194252.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SB41
      UniProtKB/TrEMBL
      A0A178UVF0, A0A5S9XXV4, A0A654FSL5
      Conserved Domains (1) summary
      cl28910
      Location:37 → 474
      MFS; Major Facilitator Superfamily
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SB41.1

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