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    kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829250, updated on 18-Sep-2024

    Summary

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    Official Full Name
    kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
    Primary source
    TAIR:AT4G31230
    Locus tag
    AT4G31230
    See related
    Araport:AT4G31230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8F16.50; F8F16_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    9
    Sequence:
    Chromosome: 4; NC_003075.7 (15172232..15176292, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene oxidoreductase Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein Neighboring gene DNA topoisomerase, type IA, core Neighboring gene protein kinase C-like zinc finger protein Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. HDA18 affects cell fate in Arabidopsis root epidermis via histone acetylation at four kinase genes. Liu C, et al. Plant Cell, 2013 Jan. PMID 23362208, Free PMC Article
    2. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001342067.1
    NM_119272.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within root epidermal cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
    NP_194851.2
    • Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT2G24370.1); Has 112628 Blast hits to 110541 proteins in 4515 species: Archae - 108; Bacteria - 14372; Metazoa - 40671; Fungi - 8662; Plants - 31951; Viruses - 236; Other Eukaryotes - 16628 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15172232..15176292 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119272.3 → NP_194851.2  kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194851.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654FUG6, Q1PE30
      Conserved Domains (3) summary
      cd01989
      Location:17 → 172
      STK_N; The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein ...
      cd14066
      Location:473 → 733
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
      pfam00069
      Location:467 → 720
      Pkinase; Protein kinase domain

    2. NM_001342067.1 → NP_001328658.1  kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B5B9, A0A654FUG6
    Nucleotide Protein
    Heading Accession and Version

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