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    transmembrane/coiled-coil protein (DUF726) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829778, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transmembrane/coiled-coil protein (DUF726)
    Primary source
    TAIR:AT4G36210
    Locus tag
    AT4G36210
    See related
    Araport:AT4G36210
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23E13.100; F23E13_100
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    14
    Sequence:
    Chromosome: 4; NC_003075.7 (17130246..17134656)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Serine carboxypeptidase S28 family protein Neighboring gene Serine carboxypeptidase S28 family protein Neighboring gene tRNA-Glu Neighboring gene ncRNA Neighboring gene ferulic acid 5-hydroxylase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001085031.1
    NM_119789.2
    NM_179174.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transmembrane/coiled-coil protein (DUF726)
    NP_001078500.2
    • Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_195344.1
    • Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 613 Blast hits to 567 proteins in 193 species: Archae - 6; Bacteria - 71; Metazoa - 129; Fungi - 237; Plants - 65; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
    NP_849505.2
    • Protein of unknown function (DUF726); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 675 Blast hits to 638 proteins in 219 species: Archae - 12; Bacteria - 101; Metazoa - 133; Fungi - 230; Plants - 68; Viruses - 0; Other Eukaryotes - 131 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17130246..17134656
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179174.3 → NP_849505.2  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849505.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYI2, F4JPN3
      Conserved Domains (1) summary
      cl21494
      Location:191 → 540
      Abhydrolase; alpha/beta hydrolases

    2. NM_001085031.1 → NP_001078500.2  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078500.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYI2, B3H797
      Conserved Domains (1) summary
      cl21494
      Location:313 → 662
      Abhydrolase; alpha/beta hydrolases

    3. NM_119789.2 → NP_195344.1  transmembrane/coiled-coil protein (DUF726) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195344.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O65513
      Conserved Domains (1) summary
      cl21494
      Location:191 → 506
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version

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