PGPS2 phosphatidylglycerolphosphate synthase 2 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: PGPS2
Official Full Name: phosphatidylglycerolphosphate synthase 2
Primary source: TAIR:AT3G55030
Locus tag: AT3G55030
See related: Araport:AT3G55030
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: phosphatidylglycerolphosphate synthase 2
Summary: Encodes a phosphatidylglycerolphosphate synthase.
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Genomic context

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See PGPS2 in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 6

Sequence:: Chromosome: 3; NC_003074.8 (20396597..20398653)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_115361.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity	IDA Inferred from Direct Assay more info	PubMed
enables manganese ion binding	IDA Inferred from Direct Assay more info	PubMed

Process	Evidence Code	Pubs
involved_in phosphatidylglycerol biosynthetic process	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chloroplast envelope	HDA more info	PubMed
located_in intracellular membrane-bounded organelle	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: phosphatidylglycerolphosphate synthase 2

NP_191063.1

phosphatidylglycerolphosphate synthase 2 (PGPS2); FUNCTIONS IN: CDP-alcohol phosphatidyltransferase activity, CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity; INVOLVED IN: phospholipid biosynthetic process; LOCATED IN: microsome, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (InterPro:IPR004570), CDP-alcohol phosphatidyltransferase (InterPro:IPR000462); BEST Arabidopsis thaliana protein match is: phosphatidylglycerolphosphate synthase 1 (TAIR:AT2G39290.1); Has 7778 Blast hits to 7778 proteins in 2365 species: Archae - 2; Bacteria - 5045; Metazoa - 114; Fungi - 125; Plants - 120; Viruses - 0; Other Eukaryotes - 2372 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

20396597..20398653

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_115361.3 → NP_191063.1 phosphatidylglycerolphosphate synthase 2 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_191063.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9M2W3

UniProtKB/TrEMBL

A0A178VAK6, A0A5S9XL80

Conserved Domains (1) summary

PLN02558
Location:33 → 232

PLN02558; CDP-diacylglycerol-glycerol-3-phosphate/ 3-phosphatidyltransferase