SYP132 syntaxin of plants 132 [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: SYP132
Official Full Name: syntaxin of plants 132
Primary source: TAIR:AT5G08080
Locus tag: AT5G08080
See related: Araport:AT5G08080
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: ATSYP132; syntaxin of plants 132; T22D6.20; T22D6_20
Summary: member of SYP13 Gene Family
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Genomic context

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See SYP132 in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 14

Sequence:: Chromosome: 5; NC_003076.8 (2588160..2591406)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Arabidopsis SNARE SYP132 impacts on PIP2;1 trafficking and function in salinity stress.
Title: Arabidopsis SNARE SYP132 impacts on PIP2;1 trafficking and function in salinity stress.
SNARE SYP132 mediates divergent traffic of plasma membrane H+-ATPase AHA1 and antimicrobial PR1 during bacterial pathogenesis.
Title: SNARE SYP132 mediates divergent traffic of plasma membrane H+-ATPase AHA1 and antimicrobial PR1 during bacterial pathogenesis.
Trafficking SNARE SYP132 Partakes in Auxin-Associated Root Growth.
Title: Trafficking SNARE SYP132 Partakes in Auxin-Associated Root Growth.
Unusual Roles of Secretory SNARE SYP132 in Plasma Membrane H(+)-ATPase Traffic and Vegetative Plant Growth.
Title: Unusual Roles of Secretory SNARE SYP132 in Plasma Membrane H(+)-ATPase Traffic and Vegetative Plant Growth.
These results demonstrate that SYP123 and SYP132 act in a coordinated fashion to mediate tip-focused membrane trafficking for root hair tip growth.
Title: Syntaxin of plant proteins SYP123 and SYP132 mediate root hair tip growth in Arabidopsis thaliana.
SYP132 is ubiquitously expressed, and is localized uniformly on the plasma membrane.
Title: Differential expression control and polarized distribution of plasma membrane-resident SYP1 SNAREs in Arabidopsis thaliana.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Homology

Orthologs from OrthoDB

NM_001036776.1

Supported by ESTs:

NM_001203327.1

Supported by ESTs:

NM_001342978.1

Supported by ESTs:

NM_001342979.1

Supported by ESTs:

NM_120890.3

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables SNAP receptor activity	IEA Inferred from Electronic Annotation more info
enables SNAP receptor activity	TAS Traceable Author Statement more info	PubMed
enables protein binding	IPI Inferred from Physical Interaction more info	PubMed

Process	Evidence Code	Pubs
involved_in endocytosis	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in intracellular protein transport	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within intracellular protein transport	TAS Traceable Author Statement more info	PubMed
acts_upstream_of_or_within membrane fusion	TAS Traceable Author Statement more info	PubMed
involved_in vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cell plate	IDA Inferred from Direct Assay more info	PubMed
NOT located_in cytosol	RCA inferred from Reviewed Computational Analysis more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info
located_in nucleus	ISM Inferred from Sequence Model more info
located_in plasma membrane	HDA more info	PubMed
located_in plasma membrane	IDA Inferred from Direct Assay more info	PubMed
located_in plasmodesma	HDA more info	PubMed
located_in trans-Golgi network	IDA Inferred from Direct Assay more info	PubMed

General protein information

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Preferred Names: syntaxin of plants 132

NP_001190256.1

syntaxin of plants 132 (SYP132); CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1).

NP_001318506.1

syntaxin of plants 132 (SYP132); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: t-SNARE (InterPro:IPR010989), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1); Has 544 Blast hits to 544 proteins in 115 species: Archae - 0; Bacteria - 3; Metazoa - 204; Fungi - 36; Plants - 277; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).

NP_568187.1

syntaxin of plants 132 (SYP132); FUNCTIONS IN: SNAP receptor activity; INVOLVED IN: intracellular protein transport, cellular membrane fusion; LOCATED IN: plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Target SNARE coiled-coil domain (InterPro:IPR000727), t-SNARE (InterPro:IPR010989), Syntaxin/epimorphin, conserved site (InterPro:IPR006012), Syntaxin, N-terminal (InterPro:IPR006011); BEST Arabidopsis thaliana protein match is: syntaxin of plants 131 (TAIR:AT3G03800.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

2588160..2591406

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_120890.3 → NP_568187.1 syntaxin of plants 132 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_568187.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8VZU2, Q9LEZ8

UniProtKB/TrEMBL

A0A178U9Y3, A0A5S9Y345, A0A7G2F960

Conserved Domains (2) summary

pfam00804
Location:34 → 239

Syntaxin

cl22856
Location:207 → 273

SNARE; SNARE motif
NM_001342979.1 → NP_001332203.1 syntaxin of plants 132 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/Swiss-Prot

Q8VZU2, Q9LEZ8

UniProtKB/TrEMBL

A0A178U9Y3, A0A5S9Y345, A0A7G2F960

Conserved Domains (2) summary

pfam00804
Location:34 → 239

Syntaxin

cl22856
Location:207 → 273

SNARE; SNARE motif
NM_001342978.1 → NP_001318506.1 syntaxin of plants 132 [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

F4K9K4
NM_001203327.1 → NP_001190256.1 syntaxin of plants 132 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001190256.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A7G2F960, F4K9K2

Conserved Domains (3) summary

cd00179
Location:34 → 202

SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...

cd15848
Location:214 → 276

SNARE_syntaxin1-like; SNARE motif of syntaxin 1 and related proteins

pfam00804
Location:34 → 250

Syntaxin; Syntaxin
NM_001036776.1 → NP_001031853.1 syntaxin of plants 132 [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001031853.1

Status: REVIEWED

UniProtKB/TrEMBL

F4K9K4

Conserved Domains (1) summary

cd00179
Location:34 → 191

SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...