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    hypothetical protein (DUF789) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832402, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF789)
    Primary source
    TAIR:AT5G23380
    Locus tag
    AT5G23380
    See related
    Araport:AT5G23380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T32G24.1; T32G24_1
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (7866742..7870384)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene GRAM domain-containing protein / ABA-responsive protein-like protein Neighboring gene GRAM domain-containing protein / ABA-responsive protein-like protein Neighboring gene polygalacturonase inhibitor (DUF639) Neighboring gene Cox19-like CHCH family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343799.1
    NM_001343800.1
    NM_122244.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    hypothetical protein (DUF789)
    NP_197729.1
    • Protein of unknown function (DUF789); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      7866742..7870384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_122244.4 → NP_197729.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197729.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9Y6P8, A0A654G3F7, Q9FGE1
      Conserved Domains (1) summary
      pfam05623
      Location:7 → 291
      DUF789; Protein of unknown function (DUF789)

    2. NM_001343799.1 → NP_001331169.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD57

    3. NM_001343800.1 → NP_001331170.1  hypothetical protein (DUF789) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BD57
    Nucleotide Protein
    Heading Accession and Version

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