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    ORG1 OBP3-responsive protein 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835426, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ORG1
    Official Full Name
    OBP3-responsive protein 1
    Primary source
    TAIR:AT5G53450
    Locus tag
    AT5G53450
    See related
    Araport:AT5G53450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MYN8.6; MYN8_6; OBP3-responsive gene 1
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    Genomic context

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    See ORG1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Sequence:
    Chromosome: 5; NC_003076.8 (21688763..21692480)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene CCT motif family protein Neighboring gene SET domain group 29 Neighboring gene LOW protein: zinc finger CCCH domain protein Neighboring gene ncRNA Neighboring gene NADH-dependent glutamate synthase 1 Neighboring gene acyl-CoA binding protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Chloroplast Localized FIBRILLIN11 Is Involved in the Osmotic Stress Response during Arabidopsis Seed Germination. Choi YR, et al. Biology (Basel), 2021 Apr 25. PMID 33922967, Free PMC Article
    2. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_124724.5
    NM_180851.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to osmotic stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    OBP3-responsive protein 1
    NP_200157.2
    • OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 596 Blast hits to 592 proteins in 153 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 310; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).
    NP_851182.1
    • OBP3-responsive gene 1 (ORG1); FUNCTIONS IN: structural molecule activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase PLK4 (InterPro:IPR020664), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Plastid lipid-associated protein/fibrillin (InterPro:IPR006843), Protein kinase-like domain (InterPro:IPR011009); Has 595 Blast hits to 591 proteins in 152 species: Archae - 0; Bacteria - 3; Metazoa - 162; Fungi - 48; Plants - 309; Viruses - 0; Other Eukaryotes - 73 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      21688763..21692480
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345057.1 → NP_001332629.1  OBP3-responsive protein 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1R7T381

    2. NM_124724.5 → NP_200157.2  OBP3-responsive protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200157.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2FG08
      Conserved Domains (2) summary
      pfam04755
      Location:354 → 507
      PAP_fibrillin
      cl21453
      Location:26 → 319
      PKc_like; Protein Kinases, catalytic domain

    3. NM_180851.2 → NP_851182.1  OBP3-responsive protein 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851182.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      C0Z3D5, Q8VZ70, Q9LV04
      UniProtKB/TrEMBL
      A0A178UFE4, A0A5S9YDM8, A0A7G2FG08
      Conserved Domains (2) summary
      pfam04755
      Location:434 → 587
      PAP_fibrillin
      cl21453
      Location:106 → 399
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LV04.1

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