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    CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836011, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CRCK1
    Official Full Name
    calmodulin-binding receptor-like cytoplasmic kinase 1
    Primary source
    TAIR:AT5G58940
    Locus tag
    AT5G58940
    See related
    Araport:AT5G58940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    calmodulin-binding receptor-like cytoplasmic kinase 1; K19M22.13; K19M22_13
    Summary
    Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA
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    Genomic context

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    See CRCK1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (23797446..23800954)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene homeobox prospero protein Neighboring gene hypothetical protein (DUF740) Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene glucose-6-phosphate isomerase, putative (DUF641) Neighboring gene ncRNA Neighboring gene uncoupling protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Calcium/calmodulin up-regulates a cytoplasmic receptor-like kinase in plants. Yang T, et al. J Biol Chem, 2004 Oct 8. PMID 15292241
    2. An S-locus receptor-like kinase plays a role as a negative regulator in plant defense responses. Kim HS, et al. Biochem Biophys Res Commun, 2009 Apr 10. PMID 19222996
    3. An S-locus receptor-like kinase in plasma membrane interacts with calmodulin in Arabidopsis. Kim HS, et al. FEBS Lett, 2009 Jan 5. PMID 19071125
    4. A receptor-like kinase from Arabidopsis thaliana is a calmodulin-binding protein. Charpenteau M, et al. Biochem J, 2004 May 1. PMID 14720124, Free PMC Article
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. physiological function of CBRLK1 that was induced by a bacterial pathogen and salicylic acid was investigated.
      Title: An S-locus receptor-like kinase plays a role as a negative regulator in plant defense responses.
    2. A calmodulin-binding receptor-like protein kinase (CBRLK1) that was classified into an S-locus RLK family was identified.
      Title: An S-locus receptor-like kinase in plasma membrane interacts with calmodulin in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001345330.1
    NM_001345331.1
    NM_001345332.1
    NM_125284.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium/calmodulin-dependent protein kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables calmodulin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to cold IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to hydrogen peroxide IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    calmodulin-binding receptor-like cytoplasmic kinase 1
    NP_001318835.1
    • calmodulin-binding receptor-like cytoplasmic kinase 1 (CRCK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calmodulin-binding receptor-like cytoplasmic kinase 2 (TAIR:AT4G00330.1); Has 122529 Blast hits to 121159 proteins in 4751 species: Archae - 123; Bacteria - 14655; Metazoa - 45015; Fungi - 10498; Plants - 33517; Viruses - 482; Other Eukaryotes - 18239 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      23797446..23800954
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345330.1 → NP_001318835.1  calmodulin-binding receptor-like cytoplasmic kinase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5YCZ4, Q9FIL7
      UniProtKB/TrEMBL
      A0A654GCW8, A0A7G2FNG6
      Conserved Domains (1) summary
      cd14066
      Location:153 → 421
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. NM_001345331.1 → NP_001332082.1  calmodulin-binding receptor-like cytoplasmic kinase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5YCZ4, Q9FIL7
      UniProtKB/TrEMBL
      A0A654GCW8, A0A7G2FNG6
      Conserved Domains (1) summary
      cd14066
      Location:153 → 421
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    3. NM_001345332.1 → NP_001332083.1  calmodulin-binding receptor-like cytoplasmic kinase 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5YCZ4, Q9FIL7
      UniProtKB/TrEMBL
      A0A654GCW8, A0A7G2FNG6
      Conserved Domains (1) summary
      cd14066
      Location:153 → 421
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    4. NM_125284.4 → NP_200702.2  calmodulin-binding receptor-like cytoplasmic kinase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200702.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5YCZ4, Q9FIL7
      UniProtKB/TrEMBL
      A0A654GCW8, A0A7G2FNG6
      Conserved Domains (1) summary
      cd14066
      Location:153 → 421
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FIL7.1

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