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    tRNA-methyltransferase non-catalytic subunit trm6MTase subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836776, updated on 18-Sep-2024

    Summary

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    Official Full Name
    tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
    Primary source
    TAIR:AT5G66440
    Locus tag
    AT5G66440
    See related
    Araport:AT5G66440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K1F13.9; K1F13_9
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (26529919..26531176, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene thioredoxin domain PLP3B-like protein Neighboring gene TIM-barrel signal transduction protein Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein Neighboring gene miscRNA Neighboring gene Glycosyl hydrolase superfamily protein Neighboring gene GTP-binding protein Era-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_126042.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
    NP_201445.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26529919..26531176 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_126042.3 → NP_201445.1  tRNA-methyltransferase non-catalytic subunit trm6MTase subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201445.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UE98, A0A654GEQ9, Q9FJZ5
    Nucleotide Protein
    Heading Accession and Version

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