U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    DGS1 dgd1 suppressor 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831104, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    DGS1
    Official Full Name
    dgd1 suppressor 1
    Primary source
    TAIR:AT5G12290
    Locus tag
    AT5G12290
    See related
    Araport:AT5G12290
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DGD1 SUPPRESSOR 1
    Summary
    Encodes a mitochondrial outer membrane protein, involved in galactoglycerolipid biosynthesis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See DGS1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (3974119..3978221, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein Neighboring gene Calcium-dependent lipid-binding (CaLB domain) family protein Neighboring gene RING/U-box superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phosphate regulation of lipid biosynthesis in Arabidopsis is independent of the mitochondrial outer membrane DGS1 complex. Moellering ER, et al. Plant Physiol, 2010 Apr. PMID 20181751, Free PMC Article
    2. Mutation of a mitochondrial outer membrane protein affects chloroplast lipid biosynthesis. Xu C, et al. Plant J, 2008 Apr. PMID 18208519
    3. Arabidopsis DGD1 SUPPRESSOR1 Is a Subunit of the Mitochondrial Contact Site and Cristae Organizing System and Affects Mitochondrial Biogenesis. Li L, et al. Plant Cell, 2019 Aug. PMID 31118221, Free PMC Article
    4. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
    5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_001343232.1
    NM_001343233.1
    NM_001343234.1
    NM_121267.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within galactolipid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within hydrogen peroxide biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within mitochondrion organization IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to water deprivation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MICOS complex IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrial outer membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    part_of protein-containing complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    dgd1 suppressor 1
    NP_568262.2
    • DGD1 SUPPRESSOR 1 (DGS1); INVOLVED IN: galactolipid biosynthetic process, hydrogen peroxide biosynthetic process; LOCATED IN: mitochondrial outer membrane, mitochondrion, protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nuclear control of ATP synthase 2 (InterPro:IPR013946); Has 223 Blast hits to 223 proteins in 116 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 125; Plants - 59; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3974119..3978221 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121267.5 → NP_568262.2  dgd1 suppressor 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568262.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GUK1, Q8GWL0, Q94CL3
      UniProtKB/TrEMBL
      A0A178UP20, A0A5S9Y5R6
      Conserved Domains (1) summary
      pfam08637
      Location:317 → 592
      NCA2; ATP synthase regulation protein NCA2

    2. NM_001343232.1 → NP_001330601.1  dgd1 suppressor 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBA3
      Conserved Domains (1) summary
      pfam08637
      Location:317 → 520
      NCA2; ATP synthase regulation protein NCA2

    3. NM_001343234.1 → NP_001330600.1  dgd1 suppressor 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GUK1, Q8GWL0, Q94CL3
      UniProtKB/TrEMBL
      A0A178UP20, A0A5S9Y5R6
      Conserved Domains (1) summary
      pfam08637
      Location:317 → 592
      NCA2; ATP synthase regulation protein NCA2

    4. NM_001343233.1 → NP_001330602.1  dgd1 suppressor 1 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBA3
      Conserved Domains (1) summary
      pfam08637
      Location:317 → 520
      NCA2; ATP synthase regulation protein NCA2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GUK1.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.