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    CG10341 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35125, updated on 27-Dec-2024

    Summary

    Official Symbol
    CG10341provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032701
    Locus tag
    Dmel_CG10341
    See related
    AllianceGenome:FB:FBgn0032701
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG10341
    Summary
    Predicted to enable RNA binding activity. Predicted to be involved in box H/ACA snoRNP assembly and ribosome biogenesis. Predicted to be part of sno(s)RNA-containing ribonucleoprotein complex. Is expressed in several structures, including anterior endoderm anlage; dorsal pharyngeal muscle cell; embryonic anal pad; embryonic/larval midgut primordium; and gut section. Human ortholog(s) of this gene implicated in melanoma. Orthologous to human NAF1 (nuclear assembly factor 1 ribonucleoprotein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See CG10341 in Genome Data Viewer
    Location:
    37A1-37A1; 2-54 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (18698714..18700645)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (18698714..18700645)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Jwa

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables RNA binding ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    involved_in box H/ACA snoRNP assembly IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in box H/ACA snoRNP assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in pseudouridine synthesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ribosome biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in ribosome biogenesis ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    part_of sno(s)RNA-containing ribonucleoprotein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of sno(s)RNA-containing ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of sno(s)RNA-containing ribonucleoprotein complex ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG10341-PA
    CG10341-PC

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      18698714..18700645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136054.5NP_609898.1  uncharacterized protein Dmel_CG10341, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609898.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q961H3, Q9VJ62
      Related
      FBpp0080647
      Conserved Domains (1) summary
      pfam04410
      Location:269403
      Gar1; Gar1/Naf1 RNA binding region
    2. NM_001103708.2NP_001097178.2  uncharacterized protein Dmel_CG10341, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001097178.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A023GQ99
      Conserved Domains (1) summary
      pfam04410
      Location:268402
      Gar1; Gar1/Naf1 RNA binding region