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    CG43108 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 12798329, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG43108provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0262568
    Locus tag
    Dmel_CG43108
    See related
    AllianceGenome:FB:FBgn0262568
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG43108; lincRNA.338
    Orthologs
    all
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    Genomic context

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    See CG43108 in Genome Data Viewer
    Location:
    54B1-54B1; 2-82 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (17257156..17257886, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (13144661..13145391, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene muscleblind Neighboring gene long non-coding RNA:CR43660 Neighboring gene long non-coding RNA:CR45997 Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43661

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and properties of 1,119 candidate lincRNA loci in the Drosophila melanogaster genome. Young RS, et al. Genome Biol Evol, 2012. PMID 22403033, Free PMC Article
    2. Genome-wide association analysis of oxidative stress resistance in Drosophila melanogaster. Weber AL, et al. PLoS One, 2012. PMID 22496853, Free PMC Article
    3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
    5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG43108-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      17257156..17257886 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259461.1 → NP_001246390.1  uncharacterized protein Dmel_CG43108 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246390.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4K894
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4K894 A0A0B4K894

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases
    Research Materials