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    Obp46a Odorant-binding protein 46a [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36088, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Obp46aprovided by FlyBase
    Official Full Name
    Odorant-binding protein 46aprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033508
    Locus tag
    Dmel_CG12905
    See related
    AllianceGenome:FB:FBgn0033508
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12905; DmelObp46a; Dmel\CG12905
    Summary
    Predicted to enable odorant binding activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Obp46a in Genome Data Viewer
    Location:
    47A1-47A1; 2-62 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10311172..10312023, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6198677..6199528, complement)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Ribonuclease Z Neighboring gene uncharacterized protein Neighboring gene Nidogen Neighboring gene uncharacterized protein Neighboring gene slowpoke 2 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Dissection of Nidogen function in Drosophila reveals tissue-specific mechanisms of basement membrane assembly. Dai J, et al. PLoS Genet, 2018 Sep. PMID 30260959, Free PMC Article
    2. "Plus-C" odorant-binding protein genes in two Drosophila species and the malaria mosquito Anopheles gambiae. Zhou JJ, et al. Gene, 2004 Feb 18. PMID 14960367
    3. Mutations of the withered (whd) gene in Drosophila melanogaster confer hypersensitivity to oxidative stress and are lesions of the carnitine palmitoyltransferase I (CPT I) gene. Strub BR, et al. Genome, 2008 Jun. PMID 18521119
    4. Uncovering the functional constraints underlying the genomic organization of the odorant-binding protein genes. Librado P, et al. Genome Biol Evol, 2013. PMID 24148943, Free PMC Article
    5. Genome-wide analysis of the odorant-binding protein gene family in Drosophila melanogaster. Hekmat-Scafe DS, et al. Genome Res, 2002 Sep. PMID 12213773, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Odorant-binding protein 46a
    Names
    CG12905-PA
    Obp46a-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      10311172..10312023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_136730.1 → NP_610574.1  Odorant-binding protein 46a [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610574.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1Z875, D3PK95
      Related
      FBpp0087448, FBtr0088359
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1Z875 A1Z875

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