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    Prokr1 prokineticin receptor 1 [ Mus musculus (house mouse) ]

    Gene ID: 58182, updated on 27-Dec-2024

    Summary

    Official Symbol
    Prokr1provided by MGI
    Official Full Name
    prokineticin receptor 1provided by MGI
    Primary source
    MGI:MGI:1929676
    See related
    Ensembl:ENSMUSG00000049409 AllianceGenome:MGI:1929676
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Pkr1; Gpr73; Pk-r1; EG-VEGFR1
    Summary
    Predicted to enable G protein-coupled receptor activity. Predicted to be involved in several processes, including cellular response to hormone stimulus; circadian rhythm; and negative regulation of apoptotic process. Predicted to be active in plasma membrane. Is expressed in several structures, including central nervous system; eye; gut; metanephros; and reproductive system. Orthologous to human PROKR1 (prokineticin receptor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Broad expression in genital fat pad adult (RPKM 3.3), liver E14.5 (RPKM 2.0) and 19 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Prokr1 in Genome Data Viewer
    Location:
    6 D1; 6 38.28 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (87555568..87567741, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (87578586..87590762, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 10 Neighboring gene Rho GTPase activating protein 25 Neighboring gene STARR-positive B cell enhancer ABC_E861 Neighboring gene STARR-positive B cell enhancer ABC_E4843 Neighboring gene STARR-positive B cell enhancer ABC_E3663 Neighboring gene CapStarr-seq enhancer MGSCv37_chr6:87492045-87492293 Neighboring gene STARR-seq mESC enhancer starr_16556 Neighboring gene STARR-positive B cell enhancer ABC_E680 Neighboring gene STARR-seq mESC enhancer starr_16558 Neighboring gene predicted gene, 34222 Neighboring gene STARR-seq mESC enhancer starr_16560 Neighboring gene predicted gene, 34312 Neighboring gene STARR-seq mESC enhancer starr_16563 Neighboring gene aprataxin and PNKP like factor Neighboring gene predicted gene, 46964

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Pathways from PubChem

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables G protein-coupled receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables G protein-coupled receptor activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables neuropeptide Y receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within G protein-coupled receptor signaling pathway TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in cellular response to hormone stimulus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in circadian rhythm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within circadian rhythm TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in coronary vasculature development TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in negative regulation of apoptotic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    prokineticin receptor 1
    Names
    G-protein coupled receptor 73

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001355655.1NP_001342584.1  prokineticin receptor 1

      Status: VALIDATED

      Source sequence(s)
      AC125171
      Consensus CDS
      CCDS20323.1
      UniProtKB/Swiss-Prot
      Q3U0M4, Q6PD11, Q9JKL1
      Related
      ENSMUSP00000144999.2, ENSMUST00000204682.3
      Conserved Domains (1) summary
      cd15204
      Location:63353
      7tmA_prokineticin-R; prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
    2. NM_021381.4NP_067356.2  prokineticin receptor 1

      See identical proteins and their annotated locations for NP_067356.2

      Status: VALIDATED

      Source sequence(s)
      AC125171, BC059003
      Consensus CDS
      CCDS20323.1
      UniProtKB/Swiss-Prot
      Q3U0M4, Q6PD11, Q9JKL1
      Related
      ENSMUSP00000059034.8, ENSMUST00000050887.9
      Conserved Domains (1) summary
      cd15204
      Location:63353
      7tmA_prokineticin-R; prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      87555568..87567741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006506433.5XP_006506496.1  prokineticin receptor 1 isoform X2

      Conserved Domains (2) summary
      cd14964
      Location:1848
      7tm_GPCRs; TM helix 3 [structural motif]
      cl28897
      Location:1234
      7tm_GPCRs; seven-transmembrane G protein-coupled receptor superfamily
    2. XM_006506432.5XP_006506495.1  prokineticin receptor 1 isoform X1

      See identical proteins and their annotated locations for XP_006506495.1

      UniProtKB/Swiss-Prot
      Q3U0M4, Q6PD11, Q9JKL1
      Conserved Domains (1) summary
      cd15204
      Location:63353
      7tmA_prokineticin-R; prokineticin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors