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    algG alginate-c5-mannuronan-epimerase AlgG [ Pseudomonas aeruginosa PAO1 ]

    Gene ID: 879839, updated on 11-Sep-2024

    Summary

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    Gene symbol
    algG
    Gene description
    alginate-c5-mannuronan-epimerase AlgG
    Locus tag
    PA3545
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pseudomonas aeruginosa PAO1 (strain: PAO1)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas
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    Genomic context

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    Sequence:
    NC_002516.2 (3969942..3971573)

    NC_002516.2Genomic Context describing neighboring genes Neighboring gene alginate biosynthesis protein Alg44 Neighboring gene alginate biosynthesis protein AlgK Neighboring gene alginate production protein AlgE Neighboring gene alginate biosynthesis protein AlgX Neighboring gene alginate lyase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_002516.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The dual roles of AlgG in C-5-epimerization and secretion of alginate polymers in Pseudomonas aeruginosa. Jain S, et al. Mol Microbiol, 2003 Feb. PMID 12581364
    2. Pseudomonas aeruginosa AlgG is a polymer level alginate C5-mannuronan epimerase. Franklin MJ, et al. J Bacteriol, 1994 Apr. PMID 8144447, Free PMC Article
    3. Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes. Winsor GL, et al. Nucleic Acids Res, 2009 Jan. PMID 18978025, Free PMC Article
    4. Defining the Pseudomonas aeruginosa SOS response and its role in the global response to the antibiotic ciprofloxacin. Cirz RT, et al. J Bacteriol, 2006 Oct. PMID 17015649, Free PMC Article
    5. Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology. Palmer KL, et al. J Bacteriol, 2005 Aug. PMID 16030221, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by PseudoCAP

    Process Evidence Code Pubs
    acts_upstream_of_or_within alginic acid biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within alginic acid biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to stimulus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alginate-c5-mannuronan-epimerase AlgG
    NP_252235.1
    • Product name confidence: class 1 (Function experimentally demonstrated in P. aeruginosa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_002516.2 Reference assembly

      Range
      3969942..3971573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_252235.1 alginate-c5-mannuronan-epimerase AlgG [Pseudomonas aeruginosa PAO1]

      See identical proteins and their annotated locations for NP_252235.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      M4WPD2
      Conserved Domains (1) summary
      pfam13229
      Location:298 → 443
      Beta_helix; Right handed beta helix region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q51371.1

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