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    Or85f Odorant receptor 85f [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41119, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Or85fprovided by FlyBase
    Official Full Name
    Odorant receptor 85fprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037685
    Locus tag
    Dmel_CG16755
    See related
    AllianceGenome:FB:FBgn0037685
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    85D.1; 85f; CG16755; Dmel\CG16755; DmOr85f; DOR32; OR85f
    Summary
    Enables ionotropic olfactory receptor activity. Involved in detection of chemical stimulus involved in sensory perception of smell. Located in plasma membrane. Is expressed in adult olfactory receptor neuron Or49a/85f and antennal lobe glomerulus DL4. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

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    See Or85f in Genome Data Viewer
    Location:
    85D15-85D15; 3-48 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9398190..9399551)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (5223912..5225273)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Serine racemase Neighboring gene FER tyrosine kinase Neighboring gene antisense RNA:CR46145 Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein L34b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila Avoids Parasitoids by Sensing Their Semiochemicals via a Dedicated Olfactory Circuit. Ebrahim SA, et al. PLoS Biol, 2015 Dec. PMID 26674493, Free PMC Article
    2. "Super e-noses": Multi-layer perceptron classification of volatile odorants from the firing rates of cross-species olfactory receptor arrays. Bachtiar LR, et al. Annu Int Conf IEEE Eng Med Biol Soc, 2014. PMID 25570118
    3. Odorant receptor polymorphisms and natural variation in olfactory behavior in Drosophila melanogaster. Rollmann SM, et al. Genetics, 2010 Oct. PMID 20628035, Free PMC Article
    4. Neuropeptide F signaling regulates parasitoid-specific germline development and egg-laying in Drosophila. Sadanandappa MK, et al. PLoS Genet, 2021 Mar. PMID 33770070, Free PMC Article
    5. Exitron splicing of odor receptor genes in Drosophila. Shang X, et al. Proc Natl Acad Sci U S A, 2024 Mar 26. PMID 38507450, Free PMC Article

    See all (65) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables ionotropic olfactory receptor activity HDA PubMed 
    enables odorant binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables odorant binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables olfactory receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables olfactory receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception of smell HDA PubMed 
    involved_in detection of chemical stimulus involved in sensory perception of smell IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in sensory perception of smell IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in dendrite membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane HDA PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    odorant receptor 85f
    Names
    CG16755-PA
    Or85f-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9398190..9399551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079565.3 → NP_524289.1  odorant receptor 85f [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524289.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9VHE6
      UniProtKB/TrEMBL
      E2E4W1, E2E4X4, E2E4X6, E2E4Y0, E2E4Z5, E2E502
      Related
      FBpp0081506, FBtr0082028
      Conserved Domains (1) summary
      pfam02949
      Location:68 → 381
      7tm_6; 7tm Odorant receptor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VHE6.1 Q9VHE6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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