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    polyph polyphemus [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 36161, updated on 9-Dec-2024

    Summary

    Official Symbol
    polyphprovided by FlyBase
    Official Full Name
    polyphemusprovided by FlyBase
    Primary source
    FLYBASE:FBgn0033572
    Locus tag
    Dmel_CG12943
    See related
    AllianceGenome:FB:FBgn0033572
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG12943; Dmel\CG12943
    Summary
    Predicted to enable L-amino acid transmembrane transporter activity. Involved in defense response to bacterium and phagocytosis. Located in extracellular space. Is expressed in adult abdomen; adult head; and adult thorax. Human ortholog(s) of this gene implicated in iminoglycinuria. Orthologous to several human genes including SLC36A1 (solute carrier family 36 member 1); SLC36A2 (solute carrier family 36 member 2); and SLC36A3 (solute carrier family 36 member 3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See polyph in Genome Data Viewer
    Location:
    47C6-47C6; 2-63 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (10903570..10905563)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (6791075..6793068)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene NADH dehydrogenase (ubiquinone) B14 subunit Neighboring gene RNA polymerase II, I and III subunit E Neighboring gene Odorant-binding protein 47a Neighboring gene Serpin 47C

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    polyphemus
    Names
    CG12943-PA
    CG12943-PC
    polyph-PA
    polyph-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      10903570..10905563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299372.1NP_001286301.1  polyphemus, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286301.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q4V5R4
      Conserved Domains (1) summary
      cl00456
      Location:5098
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    2. NM_136787.2NP_610631.1  polyphemus, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610631.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0A0B4LG39, Q4V5R4
      Related
      FBpp0087294
      Conserved Domains (1) summary
      cl00456
      Location:50407
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain