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    Vajk3 Vajk3 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34812, updated on 17-Dec-2024

    Summary

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    Official Symbol
    Vajk3provided by FlyBase
    Official Full Name
    Vajk3provided by FlyBase
    Primary source
    FLYBASE:FBgn0028544
    Locus tag
    Dmel_CG16884
    See related
    AllianceGenome:FB:FBgn0028544
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00180.3; CG16884; Dmel\CG16884; vajk-3
    Summary
    Predicted to enable chitin binding activity. Predicted to be a structural constituent of chitin-based cuticle. Involved in wing disc development. Predicted to be active in chitin-based extracellular matrix. Is expressed in adult head; dorsal-ventral compartment boundary of the wing disc; wing anterior compartment; and wing pouch. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See Vajk3 in Genome Data Viewer
    Location:
    34E4-34E4; 2-50 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13944756..13947476, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13944756..13947476, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Ance-3 Neighboring gene uncharacterized protein Neighboring gene Vajk2 Neighboring gene Nimrod A Neighboring gene Nimrod B1 Neighboring gene Nimrod B2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding cuticular proteins are components of the Nimrod gene cluster in Drosophila. Cinege G, et al. Insect Biochem Mol Biol, 2017 Aug. PMID 28633893
    2. The UBX-regulated network in the haltere imaginal disc of D. melanogaster. Hersh BM, et al. Dev Biol, 2007 Feb 15. PMID 17174297, Free PMC Article
    3. Functional conservation of the active sites of human and Drosophila angiotensin I-converting enzyme. Coates D, et al. Biochemistry, 2000 Aug 1. PMID 10913309
    4. A conserved gene cluster as a putative functional unit in insect innate immunity. Somogyi K, et al. FEBS Lett, 2010 Nov 5. PMID 20951134
    5. Experimentally induced active and quiet sleep engage non-overlapping transcriptional programs in Drosophila. Anthoney N, et al. Elife, 2023 Nov 1. PMID 37910019, Free PMC Article

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables structural constituent of chitin-based cuticle ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chitin-based cuticle development ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    involved_in wing disc development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Vajk3
    Names
    CG16884-PA
    Vajk3-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13944756..13947476 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135846.4 → NP_609690.1  Vajk3 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609690.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3Z9
      Related
      FBpp0080134
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9V3Z9 Q9V3Z9

    Gene LinkOut

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