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    Riiad1 regulatory subunit of type II PKA R-subunit domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 100270669, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Riiad1provided by RGD
    Official Full Name
    regulatory subunit of type II PKA R-subunit domain containing 1provided by RGD
    Primary source
    RGD:2303311
    See related
    EnsemblRapid:ENSRNOG00000037310 AllianceGenome:RGD:2303311
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Orthologous to human RIIAD1 (regulatory subunit of type II PKA R-subunit domain containing 1). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Testes (RPKM 60.2), Lung (RPKM 14.7) and 2 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Riiad1 in Genome Data Viewer
    Location:
    2q34
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 2 NC_086020.1 (184788948..184807344, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 2 NC_051337.1 (182099924..182110544, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (195703259..195712479, complement)

    Chromosome 2 - NC_086020.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102556390 Neighboring gene mitochondrial ribosomal protein L9 Neighboring gene CUGBP, Elav-like family member 3 Neighboring gene sorting nexin 27 Neighboring gene uncharacterized LOC134485647 Neighboring gene nuclear receptor binding factor 2 like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    RIIa domain-containing protein 1
    Names
    regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001144957.1 → NP_001138429.1  RIIa domain-containing protein 1

      See identical proteins and their annotated locations for NP_001138429.1

      Status: VALIDATED

      Source sequence(s)
      CO401253, JAXUCZ010000002
      UniProtKB/TrEMBL
      A6K2R5, D3ZKY7
      Related
      ENSRNOP00000098811.1, ENSRNOT00000142251.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086020.1 Reference GRCr8

      Range
      184788948..184807344 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039101539.2 → XP_038957467.1  RIIa domain-containing protein 1 isoform X2

    2. XM_006232847.5 → XP_006232909.1  RIIa domain-containing protein 1 isoform X2

    3. XM_063281074.1 → XP_063137144.1  RIIa domain-containing protein 1 isoform X1

    4. XM_063281076.1 → XP_063137146.1  RIIa domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A6K2R5, D3ZKY7

    5. XM_063281075.1 → XP_063137145.1  RIIa domain-containing protein 1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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