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    CG12012 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38422, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG12012provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035444
    Locus tag
    Dmel_CG12012
    See related
    AllianceGenome:FB:FBgn0035444
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG12012
    Summary
    Orthologous to human BRI3 (brain protein I3). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG12012 in Genome Data Viewer
    Location:
    63D2-63D2; 3-8 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (3376757..3377992)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (3376757..3377992)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene YTH domain containing 1 Neighboring gene uncharacterized protein Neighboring gene Iduronate 2-sulfatase Neighboring gene long non-coding RNA:CR45737

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EMC is required for biogenesis of Xport-A, an essential chaperone of Rhodopsin-1 and the TRP channel. Gaspar CJ, et al. EMBO Rep, 2022 Jan 5. PMID 34918864, Free PMC Article
    2. Identification of conserved transcriptome features between humans and Drosophila in the aging brain utilizing machine learning on combined data from the NIH Sequence Read Archive. Webb JL, et al. PLoS One, 2021. PMID 34379632, Free PMC Article
    3. Genes expressed in the Drosophila head reveal a role for fat cells in sex-specific physiology. Fujii S, et al. EMBO J, 2002 Oct 15. PMID 12374736, Free PMC Article
    4. Nociceptor-Enriched Genes Required for Normal Thermal Nociception. Honjo K, et al. Cell Rep, 2016 Jul 12. PMID 27346357, Free PMC Article
    5. Ultra-deep sequencing of ribosome-associated poly-adenylated RNA in early Drosophila embryos reveals hundreds of conserved translated sORFs. Li H, et al. DNA Res, 2016 Dec. PMID 27559081, Free PMC Article

    See all (30) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG12012-PA
    CG12012-PB
    CG12012-PC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      3376757..3377992
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001300000.1 → NP_001286929.1  uncharacterized protein Dmel_CG12012, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286929.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZP9
      Conserved Domains (1) summary
      pfam10164
      Location:31 → 122
      DUF2367; Uncharacterized conserved protein (DUF2367)

    2. NM_001169868.2 → NP_001163339.1  uncharacterized protein Dmel_CG12012, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163339.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q1ECB1
      Conserved Domains (1) summary
      pfam10164
      Location:1 → 81
      DUF2367; Uncharacterized conserved protein (DUF2367)

    3. NM_139556.2 → NP_647813.1  uncharacterized protein Dmel_CG12012, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647813.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VZP9
      Related
      FBpp0072938
      Conserved Domains (1) summary
      pfam10164
      Location:31 → 122
      DUF2367; Uncharacterized conserved protein (DUF2367)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q1ECB1 Q1ECB1
    Q9VZP9 Q9VZP9

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