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    CG31678 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35327, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31678provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051678
    Locus tag
    Dmel_CG31678
    See related
    AllianceGenome:FB:FBgn0051678
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    38D.30; CG17465; CG17466; Dmel\CG31678
    Summary
    Predicted to be located in rough endoplasmic reticulum. Predicted to be active in cytoplasm and membrane. Is expressed in adult head. Orthologous to human SUCO (SUN domain containing ossification factor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31678 in Genome Data Viewer
    Location:
    38D2-38D4; 2-54 cM
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (20659132..20675941, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (20659132..20675941, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene brunelleschi Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR45004 Neighboring gene I-kappaB kinase epsilon Neighboring gene Centrocortin Neighboring gene uncharacterized protein Neighboring gene Hormone receptor-like in 38

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular Basis for Cephalic Mechanosensitivity of Drosophila Larvae. Zhang Z, et al. Neurosci Bull, 2020 Sep. PMID 32761438, Free PMC Article
    2. Widespread Rewiring of Genetic Networks upon Cancer Signaling Pathway Activation. Billmann M, et al. Cell Syst, 2018 Jan 24. PMID 29199019, Free PMC Article
    3. The genomic response to courtship song stimulation in female Drosophila melanogaster. Immonen E, et al. Proc Biol Sci, 2012 Apr 7. PMID 21976688, Free PMC Article
    4. Genome-Wide Association Study of Circadian Behavior in Drosophila melanogaster. Harbison ST, et al. Behav Genet, 2019 Jan. PMID 30341464, Free PMC Article
    5. The evolution of constitutively active humoral immune defenses in Drosophila populations under high parasite pressure. Zhou SO, et al. PLoS Pathog, 2024 Jan. PMID 38206983, Free PMC Article

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in rough endoplasmic reticulum ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31678-PB
    CG31678-PC
    CG31678-PE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      20659132..20675941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_165336.3 → NP_724277.2  uncharacterized protein Dmel_CG31678, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724277.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU09, Q9VIK7
      Conserved Domains (1) summary
      pfam07738
      Location:409 → 532
      Sad1_UNC; Sad1 / UNC-like C-terminal

    2. NM_001144372.2 → NP_001137844.1  uncharacterized protein Dmel_CG31678, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137844.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZY0
      Conserved Domains (1) summary
      pfam07738
      Location:244 → 367
      Sad1_UNC; Sad1 / UNC-like C-terminal

    3. NM_001299177.1 → NP_001286106.1  uncharacterized protein Dmel_CG31678, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286106.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7YZY0
      Conserved Domains (1) summary
      pfam07738
      Location:244 → 367
      Sad1_UNC; Sad1 / UNC-like C-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B7YZY0 B7YZY0
    Q8T3X4 Q8T3X4
    Q9VIK7 Q9VIK7

    Gene LinkOut

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