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    CG13102 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34228, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG13102provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032088
    Locus tag
    Dmel_CG13102
    See related
    AllianceGenome:FB:FBgn0032088
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE57454; Dmel\CG13102
    Summary
    Is expressed in embryonic midgut chamber and embryonic/larval midgut. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG13102 in Genome Data Viewer
    Location:
    29F7-29F7; 2-34 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (9012188..9014149)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (9012188..9014149)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Trypsin 29F Neighboring gene uncharacterized protein Neighboring gene Rcd-1 related Neighboring gene long non-coding RNA:CR44352 Neighboring gene uncharacterized protein Neighboring gene Dpr-interacting protein zeta Neighboring gene long non-coding RNA:CR44483

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene. Chen S, et al. EMBO J, 2012 Jun 13. PMID 22543869, Free PMC Article
    2. Drcd-1 related: a positively selected spermatogenesis retrogene in Drosophila. Quezada-Díaz JE, et al. Genetica, 2010 Oct. PMID 20694743, Free PMC Article
    3. Crooked, coiled and crimpled are three Ly6-like proteins required for proper localization of septate junction components. Nilton A, et al. Development, 2010 Jul. PMID 20570942, Free PMC Article
    4. boudin is required for septate junction organisation in Drosophila and codes for a diffusible protein of the Ly6 superfamily. Hijazi A, et al. Development, 2009 Jul. PMID 19502482
    5. A genome-wide RNA interference screen identifies two novel components of the metazoan secretory pathway. Wendler F, et al. EMBO J, 2010 Jan 20. PMID 19942856, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG13102-PA
    CG13102-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      9012188..9014149
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001259019.2 → NP_001245948.1  uncharacterized protein Dmel_CG13102, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001245948.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MT42, Q9VLF3

    2. NM_135424.5 → NP_609268.2  uncharacterized protein Dmel_CG13102, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609268.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MT42, Q9VLF3
      Related
      FBpp0079367
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8MT42 Q8MT42

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