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    Cap-H2 Chromosome associated protein H2 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41289, updated on 9-Dec-2024

    Summary

    Official Symbol
    Cap-H2provided by FlyBase
    Official Full Name
    Chromosome associated protein H2provided by FlyBase
    Primary source
    FLYBASE:FBgn0037831
    Locus tag
    Dmel_CG14685
    See related
    AllianceGenome:FB:FBgn0037831
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cap-H2; CAP-H2; CapH2; CAPH2; CG14685; dCap-H2; Dmel\CG14685
    Summary
    Enables chromatin binding activity. Involved in several processes, including chromatin organization; chromosome separation; and male meiosis chromosome segregation. Predicted to be part of condensin complex. Predicted to be active in nucleus. Is expressed in nurse cell. Orthologous to human NCAPH2 (non-SMC condensin II complex subunit H2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See Cap-H2 in Genome Data Viewer
    Location:
    86C5-86C6; 3-50 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (10761310..10766756)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (6587032..6592478)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45015 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR45016 Neighboring gene Mediator complex subunit 7 Neighboring gene Transcription factor TFIIFbeta Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene fau Neighboring gene Desiccate

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chromatin binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in chromatin organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in chromatin organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chromosome condensation IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromosome organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in chromosome separation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in chromosome separation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in male meiosis chromosome segregation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in meiotic chromosome condensation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic sister chromatid separation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    part_of condensin complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of condensin complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    chromosome associated protein H2
    Names
    CG14685-PD
    CG14685-PE
    CG14685-PF
    CG14685-PG
    Cap-H2-PD
    Cap-H2-PE
    Cap-H2-PF
    Cap-H2-PG
    dCap-H2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      10761310..10766756
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141757.2NP_650014.2  chromosome associated protein H2, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650014.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C7LAG0, Q8INL2
      Conserved Domains (1) summary
      pfam16858
      Location:769844
      CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
    2. NM_169359.2NP_731503.2  chromosome associated protein H2, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731503.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0C4DHE3, C7LAG0
      Conserved Domains (1) summary
      pfam16858
      Location:768843
      CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
    3. NM_169358.2NP_731502.2  chromosome associated protein H2, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731502.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      C7LAG0, Q9VGX5
      Conserved Domains (1) summary
      pfam16858
      Location:756831
      CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term
    4. NM_206471.2NP_996193.1  chromosome associated protein H2, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996193.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YU87, Q8IHA6
      Conserved Domains (1) summary
      pfam16858
      Location:578653
      CNDH2_C; Condensin II complex subunit CAP-H2 or CNDH2, C-term