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    CG3702 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33628, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG3702provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031590
    Locus tag
    Dmel_CG3702
    See related
    AllianceGenome:FB:FBgn0031590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    cg3702; Dmel\CG3702
    Summary
    Located in endomembrane system. Is expressed in adult head and organism. Orthologous to human CLPTM1 (CLPTM1 regulator of GABA type A receptor forward trafficking). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG3702 in Genome Data Viewer
    Location:
    24D8-24E1; 2-12 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4224650..4227097, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4224650..4227097, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nicotinate phosphoribosyltransferase Neighboring gene fat Neighboring gene long non-coding RNA:CR44608 Neighboring gene Ribosomal protein L40

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X. Gorchakov AA, et al. Genes Dev, 2009 Oct 1. PMID 19797766, Free PMC Article
    2. Unwrapping glial biology: Gcm target genes regulating glial development, diversification, and function. Freeman MR, et al. Neuron, 2003 May 22. PMID 12765609
    3. Modifiers of notch transcriptional activity identified by genome-wide RNAi. Mourikis P, et al. BMC Dev Biol, 2010 Oct 19. PMID 20959007, Free PMC Article
    4. Mapping organelle proteins and protein complexes in Drosophila melanogaster. Tan DJ, et al. J Proteome Res, 2009 Jun. PMID 19317464
    5. GlycoFly: a database of Drosophila N-linked glycoproteins identified using SPEG--MS techniques. Baycin-Hizal D, et al. J Proteome Res, 2011 Jun 3. PMID 21480662

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    located_in endomembrane system HDA PubMed 
    is_active_in endomembrane system IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3702-PA
    CG3702-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      4224650..4227097 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134975.2 → NP_608819.1  uncharacterized protein Dmel_CG3702, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608819.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960I8, Q9VQX6
      Related
      FBpp0077166, FBtr0077477
      Conserved Domains (1) summary
      pfam05602
      Location:55 → 496
      CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)

    2. NM_001273088.1 → NP_001260017.1  uncharacterized protein Dmel_CG3702, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260017.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q960I8, Q9VQX6
      Conserved Domains (1) summary
      pfam05602
      Location:55 → 496
      CLPTM1; Cleft lip and palate transmembrane protein 1 (CLPTM1)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VQX6 Q9VQX6

    Gene LinkOut

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