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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_009634.2 RefSeqGene
- Range
-
5005..15192
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_131
mRNA and Protein(s)
-
NM_000116.5 → NP_000107.1 tafazzin isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the major isoform (1).
- Source sequence(s)
-
AL531401, BC005062, X92762
- Consensus CDS
-
CCDS14748.1
- UniProtKB/TrEMBL
- A0A0S2Z4K0, A0A494C004
- Related
- ENSP00000469981.1, ENST00000601016.6
- Conserved Domains (1) summary
-
- cd07989
Location:34 → 271
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
NM_001303465.2 → NP_001290394.1 tafazzin isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice junction in the 5' coding region and lacks an alternate in-frame exon in the 3' coding region compared to variant 1. The resulting isoform (5) contains an alternate segment near the N-terminus and lacks an alternate segment near the C-terminus compared to isoform 1.
- Source sequence(s)
-
AL531401, BC005062, DB192394, DQ884408, X92762
- Consensus CDS
-
CCDS94701.1
- UniProtKB/TrEMBL
- A0A087X0T0, A0A494C004, A6XNE1
- Related
- ENSP00000483636.2, ENST00000616020.5
- Conserved Domains (1) summary
-
- cd07989
Location:56 → 275
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
NM_001410698.1 → NP_001397627.1 tafazzin isoform 6
Status: REVIEWED
- Source sequence(s)
-
AC244090, AC245140
- Consensus CDS
-
CCDS94702.1
- UniProtKB/TrEMBL
- A0A494C004, A0A499FJ53
- Related
- ENSP00000419854.3, ENST00000475699.6
-
NM_181311.4 → NP_851828.1 tafazzin isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame coding exon compared to variant 1, resulting in a shorter isoform (2) compared to isoform 1.
- Source sequence(s)
-
AL531401, AY231461, BC005062, DB192394, X92762
- Consensus CDS
-
CCDS14749.1
- UniProtKB/Swiss-Prot
- A3KQT2, D3DWX2, Q16635, Q5HY43, Q5HY44, Q5HY45, Q5HY48, Q86XQ6, Q86XQ7, Q86XQ8, Q86XQ9, Q86XR0
- UniProtKB/TrEMBL
- A0A0S2Z4E6, A0A494C004
- Related
- ENSP00000481037.1, ENST00000612460.5
- Conserved Domains (1) summary
-
- cd07989
Location:34 → 241
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
NM_181312.4 → NP_851829.1 tafazzin isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an in-frame coding exon compared to variant 1, resulting in a shorter isoform (3) compared to isoform 1.
- Source sequence(s)
-
AL531401, AY231462, BC005062, DB192394, X92762
- Consensus CDS
-
CCDS14750.1
- UniProtKB/TrEMBL
- A0A0S2Z4K9, A0A494C004
- Related
- ENSP00000482070.2, ENST00000612012.5
- Conserved Domains (1) summary
-
- cd07989
Location:34 → 257
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
NM_181313.4 → NP_851830.1 tafazzin isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks two in-frame coding exons compared to variant 1, resulting in a shorter isoform (4) compared to isoform 1.
- Source sequence(s)
-
AL531401, AY231463, BC005062, DB192394, X92762
- Consensus CDS
-
CCDS35450.1
- UniProtKB/TrEMBL
- A0A0S2Z4F4, F6Y2X3
- Related
- ENSP00000478154.1, ENST00000613002.4
- Conserved Domains (1) summary
-
- cd07989
Location:34 → 227
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
RNA
-
NR_024048.3 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate donor splice site at one of the coding exons, and is also lacking an internal coding exon compared to variant 1. This results in premature translation termination rendering this transcript susceptible to NMD. This variant has transcript support, but is not expected to encode a viable protein product.
- Source sequence(s)
-
AL531401, BC005062
- Related
-
ENST00000615986.4
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000023.11 Reference GRCh38.p14 Primary Assembly
- Range
-
154411539..154421726
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006724836.2 → XP_006724899.1 tafazzin isoform X1
- UniProtKB/TrEMBL
-
A0A494C004
- Related
- ENSP00000498858.1, ENST00000652390.1
- Conserved Domains (1) summary
-
- cd07989
Location:56 → 289
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
XM_006724837.2 → XP_006724900.1 tafazzin isoform X2
- UniProtKB/TrEMBL
-
F6Y2X3
- Related
- ENSP00000358791.4, ENST00000369776.8
- Conserved Domains (2) summary
-
- COG0204
Location:60 → 294
- PlsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid transport and metabolism]
- pfam01553
Location:59 → 169
- Acyltransferase; Acyltransferase
-
XM_006724839.2 → XP_006724902.1 tafazzin isoform X4
- UniProtKB/TrEMBL
-
F6Y2X3
- Conserved Domains (1) summary
-
- cd07989
Location:56 → 245
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
XM_011531189.2 → XP_011529491.1 tafazzin isoform X5
- Conserved Domains (1) summary
-
- cl17185
Location:59 → 142
- LPLAT; Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis
-
XM_017029761.2 → XP_016885250.1 tafazzin isoform X3
- UniProtKB/TrEMBL
-
F6Y2X3
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XM_017029763.2 → XP_016885252.1 tafazzin isoform X7
-
XM_047442407.1 → XP_047298363.1 tafazzin isoform X6
- UniProtKB/TrEMBL
- A0A494C0C5, A0A494C0V5
- Related
- ENSP00000498464.1, ENST00000652358.1
-
XM_047442408.1 → XP_047298364.1 tafazzin isoform X10
- UniProtKB/TrEMBL
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A0A494C0V5
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XM_011531191.3 → XP_011529493.1 tafazzin isoform X8
- UniProtKB/TrEMBL
-
A0A494C0V5
- Related
- ENSP00000498734.1, ENST00000652354.1
- Conserved Domains (1) summary
-
- cd07989
Location:58 → 179
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
-
XM_017029764.2 → XP_016885253.1 tafazzin isoform X9
- UniProtKB/TrEMBL
-
A0A494C0V5
- Conserved Domains (1) summary
-
- cd07989
Location:57 → 178
- LPLAT_AGPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like
Alternate T2T-CHM13v2.0
Genomic
-
NC_060947.1 Alternate T2T-CHM13v2.0
- Range
-
152648045..152658233
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054327646.1 → XP_054183621.1 tafazzin isoform X1
- UniProtKB/TrEMBL
-
A0A494C004
-
XM_054327647.1 → XP_054183622.1 tafazzin isoform X2
- UniProtKB/TrEMBL
-
F6Y2X3
-
XM_054327649.1 → XP_054183624.1 tafazzin isoform X4
- UniProtKB/TrEMBL
-
F6Y2X3
-
XM_054327650.1 → XP_054183625.1 tafazzin isoform X5
-
XM_054327648.1 → XP_054183623.1 tafazzin isoform X3
- UniProtKB/TrEMBL
-
F6Y2X3
-
XM_054327652.1 → XP_054183627.1 tafazzin isoform X7
-
XM_054327651.1 → XP_054183626.1 tafazzin isoform X6
- UniProtKB/TrEMBL
- A0A494C0C5, A0A494C0V5
-
XM_054327655.1 → XP_054183630.1 tafazzin isoform X10
- UniProtKB/TrEMBL
-
A0A494C0V5
-
XM_054327653.1 → XP_054183628.1 tafazzin isoform X8
- UniProtKB/TrEMBL
-
A0A494C0V5
-
XM_054327654.1 → XP_054183629.1 tafazzin isoform X9
- UniProtKB/TrEMBL
-
A0A494C0V5
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_181314.1: Suppressed sequence
- Description
- NM_181314.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.