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    RIP2 ROP interactive partner 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818284, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RIP2
    Official Full Name
    ROP interactive partner 3
    Primary source
    TAIR:AT2G37080
    Locus tag
    AT2G37080
    See related
    Araport:AT2G37080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ROP interactive partner 2; ROP interactive partner 3; T2N18.16; T2N18_16
    Summary
    Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants).
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    Genomic context

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    See RIP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_003071.7 (15581386..15585302, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene nuclear factor Y, subunit B8 Neighboring gene TRIO/F-actin-binding protein Neighboring gene Nucleotide-diphospho-sugar transferases superfamily protein Neighboring gene protamine P1 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Microtubule-associated ROP interactors affect microtubule dynamics and modulate cell wall patterning and root hair growth. Feiguelman G, et al. Development, 2022 Nov 15. PMID 36314989, Free PMC Article
    2. RIP1 (ROP Interactive Partner 1)/ICR1 marks pollen germination sites and may act in the ROP1 pathway in the control of polarized pollen growth. Li S, et al. Mol Plant, 2008 Nov. PMID 19825600, Free PMC Article
    3. Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. Zybailov B, et al. PLoS One, 2008 Apr 23. PMID 18431481, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001336624.1
    NM_001336625.1
    NM_129264.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ROP interactive partner 3
    NP_181245.1
    • ROP interactive partner 3 (RIP3); LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: ROP interactive partner 4 (TAIR:AT3G53350.1); Has 147635 Blast hits to 77239 proteins in 3391 species: Archae - 1987; Bacteria - 30902; Metazoa - 62424; Fungi - 12574; Plants - 8109; Viruses - 683; Other Eukaryotes - 30956 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15581386..15585302 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_129264.4 → NP_181245.1  ROP interactive partner 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_181245.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WWY7, Q9ZQC5
      UniProtKB/TrEMBL
      A0A178VLY5, A0A5S9X4R0, A0A654FA72
      Conserved Domains (1) summary
      COG1196
      Location:78 → 480
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    2. NM_001336624.1 → NP_001324128.1  ROP interactive partner 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WWY7, Q9ZQC5
      UniProtKB/TrEMBL
      A0A178VLY5, A0A5S9X4R0, A0A654FA72
      Conserved Domains (1) summary
      COG1196
      Location:78 → 480
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    3. NM_001336625.1 → NP_001324129.1  ROP interactive partner 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VMG6, A0A1P8AZ83, A0A7G2EDW2
      Conserved Domains (1) summary
      COG1196
      Location:62 → 478
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQC5.1

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