U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Krtap13-20 keratin associated protein 13-20 [ Mus musculus (house mouse) ]

    Gene ID: 117172, updated on 9-Dec-2024

    Summary

    Official Symbol
    Krtap13-20provided by MGI
    Official Full Name
    keratin associated protein 13-20provided by MGI
    Primary source
    MGI:MGI:2152338
    See related
    Ensembl:ENSMUSG00000068078 AllianceGenome:MGI:2152338
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2310034C09Rik
    Summary
    Is expressed in several structures, including autopod; diaphragm; limb mesenchyme; tongue muscle; and vertebral axis musculature. Orthologous to human KRTAP13-2 (keratin associated protein 13-2). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Krtap13-20 in Genome Data Viewer
    Location:
    16 C3.3; 16 51.4 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (88555735..88556677)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 16 NC_000082.6 (88758847..88759789)

    Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene keratin associated protein 13-1 Neighboring gene STARR-seq mESC enhancer starr_41417 Neighboring gene keratin associated protein 13 Neighboring gene keratin associated protein 13-21 Neighboring gene keratin associated protein 13-23

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC117172

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_054100.3NP_473441.1  uncharacterized protein LOC117172

      See identical proteins and their annotated locations for NP_473441.1

      Status: VALIDATED

      Source sequence(s)
      AC125199
      Consensus CDS
      CCDS79475.1
      UniProtKB/TrEMBL
      Q9D746
      Related
      ENSMUSP00000140130.2, ENSMUST00000089111.5
      Conserved Domains (1) summary
      pfam05287
      Location:1209
      PMG; PMG protein

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000082.7 Reference GRCm39 C57BL/6J

      Range
      88555735..88556677
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)