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    CG5177 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34017, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG5177provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031908
    Locus tag
    Dmel_CG5177
    See related
    AllianceGenome:FB:FBgn0031908
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    21430192; 28603684; Dmel\CG5177
    Summary
    Predicted to be involved in trehalose biosynthetic process. Located in extracellular region. Is expressed in adult head; adult heart; larval muscle system; and larval somatic muscle cell. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG5177 in Genome Data Viewer
    Location:
    27F3-27F3; 2-26 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (7405227..7408600)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (7405227..7408600)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR46205 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene chameau

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular characterization of Tps1 and Treh genes in Drosophila and their role in body water homeostasis. Yoshida M, et al. Sci Rep, 2016 Jul 29. PMID 27469628, Free PMC Article
    2. Evidence of spatially varying selection acting on four chromatin-remodeling loci in Drosophila melanogaster. Levine MT, et al. Genetics, 2008 May. PMID 18245821, Free PMC Article
    3. Mechanotransduction via the LINC complex regulates DNA replication in myonuclei. Wang S, et al. J Cell Biol, 2018 Jun 4. PMID 29650775, Free PMC Article
    4. Epi-MEIF: detecting higher order epistatic interactions for complex traits using mixed effect conditional inference forests. Saha S, et al. Nucleic Acids Res, 2022 Oct 28. PMID 36107776, Free PMC Article
    5. X chromosome-linked intellectual disability protein PQBP1 associates with and regulates the translation of specific mRNAs. Wan D, et al. Hum Mol Genet, 2015 Aug 15. PMID 26002102

    See all (39) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    NOT enables trehalose-phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in trehalose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region HDA PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG5177-PA
    CG5177-PB
    trehalose-phosphatase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      7405227..7408600
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001273262.1 → NP_001260191.1  uncharacterized protein Dmel_CG5177, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260191.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VM18
      Conserved Domains (2) summary
      TIGR01484
      Location:32 → 234
      HAD-SF-IIB; HAD-superfamily hydrolase, subfamily IIB
      cl21460
      Location:5 → 259
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    2. NM_135270.3 → NP_609114.1  uncharacterized protein Dmel_CG5177, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609114.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VM18
      Related
      FBpp0079069
      Conserved Domains (2) summary
      TIGR01484
      Location:32 → 234
      HAD-SF-IIB; HAD-superfamily hydrolase, subfamily IIB
      cl21460
      Location:5 → 259
      HAD_like; Haloacid Dehalogenase-like Hydrolases
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VM18 Q9VM18

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