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    CG9008 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 34779, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG9008provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0028540
    Locus tag
    Dmel_CG9008
    See related
    AllianceGenome:FB:FBgn0028540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BG:DS00797.2; Dmel\CG9008
    Summary
    Predicted to enable glucose-6-phosphate 1-epimerase activity. Involved in defense response to virus. Predicted to be active in cytoplasm. Is expressed in several structures, including adult head; dorsal head epidermis; dorsal pharyngeal muscle cell; embryonic head epidermis; and gut section. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG9008 in Genome Data Viewer
    Location:
    34D1-34D1; 2-49 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (13774340..13780165, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (13774340..13780165, complement)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45913 Neighboring gene long non-coding RNA:CR44846 Neighboring gene mir-1002 stem loop Neighboring gene Transmembrane 9 superfamily protein member 4 Neighboring gene mir-968 stem loop Neighboring gene antisense RNA:CR31845 Neighboring gene uncharacterized protein Neighboring gene antisense RNA:CR44847 Neighboring gene uncharacterized protein Neighboring gene p38b MAP kinase Neighboring gene Engulfment ABC Transporter in the ovary

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nup98 promotes antiviral gene expression to restrict RNA viral infection in Drosophila. Panda D, et al. Proc Natl Acad Sci U S A, 2014 Sep 16. PMID 25197089, Free PMC Article
    2. Global analysis of short RNAs reveals widespread promoter-proximal stalling and arrest of Pol II in Drosophila. Nechaev S, et al. Science, 2010 Jan 15. PMID 20007866, Free PMC Article
    3. A muscle-specific p38 MAPK/Mef2/MnSOD pathway regulates stress, motor function, and life span in Drosophila. Vrailas-Mortimer A, et al. Dev Cell, 2011 Oct 18. PMID 22014527, Free PMC Article
    4. The transcription factor FoxK participates with Nup98 to regulate antiviral gene expression. Panda D, et al. mBio, 2015 Apr 7. PMID 25852164, Free PMC Article
    5. Evolutionary origin of a novel gene expression pattern through co-option of the latent activities of existing regulatory sequences. Rebeiz M, et al. Proc Natl Acad Sci U S A, 2011 Jun 21. PMID 21593416, Free PMC Article

    See all (41) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glucose-6-phosphate 1-epimerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables glucose-6-phosphate 1-epimerase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in defense response to virus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG9008-PA
    CG9008-PD
    CG9008-PE
    NP_001285908.1
    NP_609670.1
    NP_723835.3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      13774340..13780165 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_135826.3 → NP_609670.1  uncharacterized protein Dmel_CG9008, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_609670.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V3D1
      Related
      FBpp0080153
      Conserved Domains (1) summary
      cd09020
      Location:13 → 282
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    2. NM_001298979.1 → NP_001285908.1  uncharacterized protein Dmel_CG9008, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001285908.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      X2JAD3
      Conserved Domains (1) summary
      cd09020
      Location:13 → 282
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like

    3. NM_165055.3 → NP_723835.3  uncharacterized protein Dmel_CG9008, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_723835.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IP67
      Conserved Domains (1) summary
      cd09020
      Location:13 → 282
      D-hex-6-P-epi_like; D-hexose-6-phosphate epimerase-like
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IP67 Q8IP67
    Q9V3D1 Q9V3D1
    X2JAD3 X2JAD3

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