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    obst-J obstructor-J [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40202, updated on 9-Dec-2024

    Summary

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    Official Symbol
    obst-Jprovided by FlyBase
    Official Full Name
    obstructor-Jprovided by FlyBase
    Primary source
    FLYBASE:FBgn0036940
    Locus tag
    Dmel_CG7348
    See related
    AllianceGenome:FB:FBgn0036940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-EST:ParkEST360; CG7348; Dmel\CG7348; Obst-J
    Summary
    Predicted to enable chitin binding activity. Predicted to be located in chitin-based extracellular matrix. Is expressed in embryonic proventriculus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See obst-J in Genome Data Viewer
    Location:
    76F2-76F2; 3-46 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20130451..20131743, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20123551..20124843, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene gigas Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of the novel evolutionary conserved obstructor multigene family in invertebrates. Behr M, et al. FEBS Lett, 2005 Dec 19. PMID 16325182
    2. Two subunits specific to the PBAP chromatin remodeling complex have distinct and redundant functions during drosophila development. Carrera I, et al. Mol Cell Biol, 2008 Sep. PMID 18573871, Free PMC Article
    3. Activating transcription factor 3 regulates immune and metabolic homeostasis. Rynes J, et al. Mol Cell Biol, 2012 Oct. PMID 22851689, Free PMC Article
    4. A modERN resource: identification of Drosophila transcription factor candidate target genes using RNAi. Fisher WW, et al. Genetics, 2023 Apr 6. PMID 36652461, Free PMC Article
    5. Flying toward a plastic-free world: Can Drosophila serve as a model organism to develop new strategies of plastic waste management? Pignataro E, et al. Sci Total Environ, 2024 Mar 1. PMID 38199375

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables chitin binding ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in chitin-based extracellular matrix ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    obstructor-J
    Names
    CG7348-PA
    obst-J-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20130451..20131743 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_140922.4 → NP_649179.2  obstructor-J [Drosophila melanogaster]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZ58, Q9VW81
      Related
      FBpp0074635
      Conserved Domains (2) summary
      smart00494
      Location:40 → 79
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:145 → 192
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8SZ58 Q8SZ58
    Q9VW81 Q9VW81

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