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    ygaC DUF2002 domain-containing protein YgaC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947156, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ygaC
    Official Full Name
    DUF2002 domain-containing protein YgaC
    Primary source
    ECOCYC:EG12201
    Locus tag
    b2671
    See related
    ASAP:ABE-0008795
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2665
    Summary
    Regulation has been described . [More information is available at EcoCyc: EG12201].
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    Genomic context

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    Sequence:
    NC_000913.3 (2799650..2799994, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional repressor StpA with RNA chaperone activity Neighboring gene L-alanine exporter Neighboring gene DUF883 domain-containing protein YgaM Neighboring gene glutaredoxin-like protein NrdH Neighboring gene dimanganese-tyrosyl radical cofactor maintenance flavodoxin NrdI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coli. Shi X, et al. J Bacteriol, 1994 Nov. PMID 7961433, Free PMC Article
    2. A method for direct cloning of fur-regulated genes: identification of seven new fur-regulated loci in Escherichia coli. Vassinova N, et al. Microbiology (Reading), 2000 Dec. PMID 11101675
    3. Rapid acid treatment of Escherichia coli: transcriptomic response and recovery. Kannan G, et al. BMC Microbiol, 2008 Feb 26. PMID 18302792, Free PMC Article
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    DUF2002 domain-containing protein YgaC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2799650..2799994 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417157.1 DUF2002 domain-containing protein YgaC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417157.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AT20
      Conserved Domains (1) summary
      PRK10556
      Location:1 → 111
      PRK10556; hypothetical protein; Provisional
    Nucleotide Protein
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