U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    znf207a zinc finger protein 207, a [ Danio rerio (zebrafish) ]

    Gene ID: 406478, updated on 4-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    znf207aprovided by ZNC
    Official Full Name
    zinc finger protein 207, aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-2273
    See related
    Ensembl:ENSDARG00000015538 AllianceGenome:ZFIN:ZDB-GENE-040426-2273
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    znf207; zgc:77832; wu:fa03f07; wu:fb51h09
    Summary
    Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Is expressed in telencephalon. Orthologous to human ZNF207 (zinc finger protein 207). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See znf207a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (34234038..34245025)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (34104512..34115517)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103910280 Neighboring gene solute carrier family 25 member 23b Neighboring gene uncharacterized LOC108182890 Neighboring gene trinucleotide repeat containing adaptor 6C1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Comprehensive expression map of transcription regulators in the adult zebrafish telencephalon reveals distinct neurogenic niches. Diotel N, et al. J Comp Neurol, 2015 Jun 1. PMID 25556858, Free PMC Article
    2. The zebrafish gene map defines ancestral vertebrate chromosomes. Woods IG, et al. Genome Res, 2005 Sep. PMID 16109975, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    BUB3-interacting and GLEBS motif-containing protein ZNF207a

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213197.1 → NP_998362.1  BUB3-interacting and GLEBS motif-containing protein ZNF207a

      See identical proteins and their annotated locations for NP_998362.1

      Status: PROVISIONAL

      Source sequence(s)
      BC065456
      UniProtKB/TrEMBL
      A0A8M1PGK2, Q5PNM9, Q6P0T3
      Related
      ENSDARP00000044858.5, ENSDART00000044859.6
      Conserved Domains (2) summary
      PHA03247
      Location:280 → 435
      PHA03247; large tegument protein UL36; Provisional
      sd00020
      Location:13 → 34
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      34234038..34245025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005164009.5 → XP_005164066.1  BUB3-interacting and GLEBS motif-containing protein ZNF207a isoform X1

      See identical proteins and their annotated locations for XP_005164066.1

      UniProtKB/TrEMBL
      A0A8M3B100
      Conserved Domains (2) summary
      PHA03247
      Location:307 → 462
      PHA03247; large tegument protein UL36; Provisional
      sd00017
      Location:13 → 32
      ZF_C2H2; C2H2 Zn finger [structural motif]

    2. XM_009299526.4 → XP_009297801.1  BUB3-interacting and GLEBS motif-containing protein ZNF207a isoform X1

      See identical proteins and their annotated locations for XP_009297801.1

      UniProtKB/TrEMBL
      A0A8M3B100
      Conserved Domains (2) summary
      PHA03247
      Location:307 → 462
      PHA03247; large tegument protein UL36; Provisional
      sd00017
      Location:13 → 32
      ZF_C2H2; C2H2 Zn finger [structural motif]

    3. XM_068216366.1 → XP_068072467.1  BUB3-interacting and GLEBS motif-containing protein ZNF207a isoform X2

      UniProtKB/TrEMBL
      A0A8M1PGK2, Q5PNM9, Q6P0T3
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools