xpo4 exportin 4 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: xpo4provided by ZNC
Official Full Name: exportin 4provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-3062
See related: Ensembl:ENSDARG00000010281 AllianceGenome:ZFIN:ZDB-GENE-030131-3062
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fc26b07; zgc:55678; wu:fc26b07; wu:fi43b10
Summary: Predicted to enable nuclear export signal receptor activity. Predicted to be involved in protein export from nucleus. Predicted to act upstream of or within nuclear transport and protein transport. Predicted to be located in nucleus. Predicted to be part of nuclear pore. Predicted to be active in cytoplasm. Is expressed in several structures, including adaxial cell; alar plate midbrain region; eye; midbrain; and musculature system. Orthologous to human XPO4 (exportin 4). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 23

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (21306902..21357841)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (21496033..21546972)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fc26b07.x1 (e-PCR)
- UniSTS:193297

fk83g10.x1 (e-PCR)
- UniSTS:201603

fk84c08.x1 (e-PCR)
- UniSTS:201611

fi43b10.x1 (e-PCR)
- UniSTS:197521

fc26b07.x1 (e-PCR)
- UniSTS:187866

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables nuclear export signal receptor activity	IBA Inferred from Biological aspect of Ancestor more info
enables nuclear export signal receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within nuclear transport	IEA Inferred from Electronic Annotation more info
involved_in protein export from nucleus	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within protein transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in cytoplasm	IBA Inferred from Biological aspect of Ancestor more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
part_of nuclear pore	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: exportin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.