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    znf990 zinc finger protein 990 [ Danio rerio (zebrafish) ]

    Gene ID: 641418, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf990provided by ZNC
    Official Full Name
    zinc finger protein 990provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-051113-232
    See related
    AllianceGenome:ZFIN:ZDB-GENE-051113-232
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:123008; si:dkey-253d23.6
    Summary
    Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See znf990 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (9891372..9896234, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (9861690..9866552, complement)

    Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene si:dkey-253d23.2 Neighboring gene si:dkey-253d23.4 Neighboring gene wu:fi42h12 Neighboring gene zinc finger protein 845-like Neighboring gene si:dkey-253d23.8 Neighboring gene uncharacterized LOC110437771

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC123008, MGC174679

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037407.2NP_001032484.2  zinc finger protein 990

      Status: VALIDATED

      Source sequence(s)
      BX539307

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007133.7 Reference GRCz11 Primary Assembly

      Range
      9891372..9896234 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)