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    znf706 zinc finger protein 706 [ Danio rerio (zebrafish) ]

    Gene ID: 402905, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf706provided by ZNC
    Official Full Name
    zinc finger protein 706provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-454
    See related
    Ensembl:ENSDARG00000056307 AllianceGenome:ZFIN:ZDB-GENE-040718-454
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92624
    Summary
    Predicted to be located in cytoplasm and nucleus. Orthologous to human ZNF706 (zinc finger protein 706). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See znf706 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (12206158..12212865, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (12286630..12293337, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene poly A binding protein, cytoplasmic 1 b Neighboring gene small nucleolar RNA SNORA5 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide Neighboring gene uncharacterized LOC108180138 Neighboring gene grainyhead-like transcription factor 2b

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Hematopoietic gene expression profile in zebrafish kidney marrow. Song HD, et al. Proc Natl Acad Sci U S A, 2004 Nov 16. PMID 15520368, Free PMC Article
    2. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    zinc finger protein 706

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001198889.2 → NP_001185818.1  zinc finger protein 706

      See identical proteins and their annotated locations for NP_001185818.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3 and 4 encode the same protein.
      Source sequence(s)
      BX294657, EH605393
      UniProtKB/TrEMBL
      A8KBQ0, I3IRY3, Q6TGY0
      Related
      ENSDARP00000125642.1, ENSDART00000151599.3
      Conserved Domains (1) summary
      pfam04419
      Location:1 → 37
      4F5; 4F5 protein family

    2. NM_001198890.2 → NP_001185819.1  zinc finger protein 706

      See identical proteins and their annotated locations for NP_001185819.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
      Source sequence(s)
      BX294657, EH605393
      UniProtKB/TrEMBL
      A8KBQ0, I3IRY3, Q6TGY0
      Related
      ENSDARP00000126143.1, ENSDART00000142077.2
      Conserved Domains (1) summary
      pfam04419
      Location:1 → 37
      4F5; 4F5 protein family

    3. NM_001198891.2 → NP_001185820.1  zinc finger protein 706

      See identical proteins and their annotated locations for NP_001185820.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
      Source sequence(s)
      BX294657, CT724627, EH605393
      UniProtKB/TrEMBL
      A8KBQ0, I3IRY3, Q6TGY0
      Related
      ENSDARP00000118294.1, ENSDART00000140834.2
      Conserved Domains (1) summary
      pfam04419
      Location:1 → 37
      4F5; 4F5 protein family

    4. NM_205612.3 → NP_991175.1  zinc finger protein 706

      See identical proteins and their annotated locations for NP_991175.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
      Source sequence(s)
      BX294657, EH439585, EH605393
      UniProtKB/TrEMBL
      A8KBQ0, I3IRY3, Q6TGY0
      Related
      ENSDARP00000073242.3, ENSDART00000078781.5
      Conserved Domains (1) summary
      pfam04419
      Location:1 → 37
      4F5; 4F5 protein family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      12206158..12212865 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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