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    cfap97 cilia and flagella associated protein 97 [ Danio rerio (zebrafish) ]

    Gene ID: 337459, updated on 4-Jan-2025

    Summary

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    Official Symbol
    cfap97provided by ZNC
    Official Full Name
    cilia and flagella associated protein 97provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-9405
    See related
    Ensembl:ENSDARG00000056381 AllianceGenome:ZFIN:ZDB-GENE-030131-9405
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj68c08; zgc:85910; wu:fj68c08
    Summary
    Predicted to be located in motile cilium. Orthologous to human CFAP97 (cilia and flagella associated protein 97). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
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    Genomic context

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    See cfap97 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (17681038..17693259, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (16988101..17000334, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene si:ch211-197n1.2 Neighboring gene solute carrier family 25 member 4 Neighboring gene ankyrin repeat domain 37 Neighboring gene ufm1-specific peptidase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cell projection IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in cilium IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    cilia- and flagella-associated protein 97

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212778.1 → NP_997943.1  cilia- and flagella-associated protein 97

      See identical proteins and their annotated locations for NP_997943.1

      Status: PROVISIONAL

      Source sequence(s)
      BC067688
      UniProtKB/TrEMBL
      Q6NW81
      Related
      ENSDARP00000155067.1, ENSDART00000181078.1
      Conserved Domains (1) summary
      pfam13879
      Location:292 → 380
      KIAA1430; KIAA1430 homologue

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      17681038..17693259 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005168338.5 → XP_005168395.1  cilia- and flagella-associated protein 97 isoform X1

      UniProtKB/TrEMBL
      A0A8M2BFM9, B8JIG1
      Related
      ENSDARP00000114229.1, ENSDART00000146258.3
      Conserved Domains (1) summary
      pfam13879
      Location:292 → 380
      KIAA1430; KIAA1430 homologue

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394471.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      30491..39040 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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