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    tmem45a transmembrane protein 45a [ Danio rerio (zebrafish) ]

    Gene ID: 553643, updated on 9-Dec-2024

    Summary

    Official Symbol
    tmem45aprovided by ZNC
    Official Full Name
    transmembrane protein 45aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050522-34
    See related
    Ensembl:ENSDARG00000070743 AllianceGenome:ZFIN:ZDB-GENE-050522-34
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:110647
    Summary
    Predicted to be located in membrane. Is expressed in notochord and polster. Orthologous to human TMEM45A (transmembrane protein 45A). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See tmem45a in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (36821692..36837536)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (36843798..36859642)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene OPA1 mitochondrial dynamin like GTPase Neighboring gene si:ch73-29l19.1 Neighboring gene SFT2 domain containing 2a Neighboring gene chromodomain helicase DNA binding protein 1-like

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC110647

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001020617.1NP_001018453.1  transmembrane protein 45A

      See identical proteins and their annotated locations for NP_001018453.1

      Status: PROVISIONAL

      Source sequence(s)
      BC095347
      UniProtKB/TrEMBL
      A0A8M1N646, Q503F7
      Related
      ENSDARP00000094932.3, ENSDART00000104157.5
      Conserved Domains (1) summary
      pfam04819
      Location:125241
      DUF716; Family of unknown function (DUF716)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      36821692..36837536
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)