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    dhrs12 dehydrogenase/reductase (SDR family) member 12 [ Danio rerio (zebrafish) ]

    Gene ID: 556393, updated on 9-Dec-2024

    Summary

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    Official Symbol
    dhrs12provided by ZNC
    Official Full Name
    dehydrogenase/reductase (SDR family) member 12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-1134
    See related
    Ensembl:ENSDARG00000011770 AllianceGenome:ZFIN:ZDB-GENE-060929-1134
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:153679
    Summary
    Orthologous to human DHRS12 (dehydrogenase/reductase 12). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    human all
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    Genomic context

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    See dhrs12 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (23808610..23812636)
    105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (23997741..24001767)

    Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene extended synaptotagmin-like protein 3 Neighboring gene transfer RNA leucine (anticodon CAA) Neighboring gene WD repeat and FYVE domain containing 2 Neighboring gene integrator complex subunit 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Fbxw7 Limits Myelination by Inhibiting mTOR Signaling. Kearns CA, et al. J Neurosci, 2015 Nov 4. PMID 26538655, Free PMC Article
    2. The light responsive transcriptome of the zebrafish: function and regulation. Weger BD, et al. PLoS One, 2011 Feb 15. PMID 21390203, Free PMC Article
    3. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
    4. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC153679

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    dehydrogenase/reductase SDR family member 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076557.1 → NP_001070025.1  dehydrogenase/reductase SDR family member 12

      See identical proteins and their annotated locations for NP_001070025.1

      Status: PROVISIONAL

      Source sequence(s)
      BC122377
      UniProtKB/TrEMBL
      Q0D284
      Related
      ENSDARP00000041991.7, ENSDART00000041992.8
      Conserved Domains (2) summary
      COG1028
      Location:39 → 273
      FabG; NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Lipid transport and metabolism, Secondary metabolites biosynthesis, transport and catabolism, General function prediction only]
      cl21454
      Location:40 → 293
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007120.7 Reference GRCz11 Primary Assembly

      Range
      23808610..23812636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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