U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    fshr follicle stimulating hormone receptor [ Danio rerio (zebrafish) ]

    Gene ID: 195820, updated on 9-Dec-2024

    Summary

    Official Symbol
    fshrprovided by ZNC
    Official Full Name
    follicle stimulating hormone receptorprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-020423-5
    See related
    Ensembl:ENSDARG00000071494 AllianceGenome:ZFIN:ZDB-GENE-020423-5
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    GTHR-I; zfGTHR-I
    Summary
    Enables follicle-stimulating hormone receptor activity. Acts upstream of or within male gonad development; ovarian follicle development; and spermatogenesis. Predicted to be located in basolateral plasma membrane and lateral plasma membrane. Predicted to be active in plasma membrane. Is expressed in Leydig cell; female organism; gonad; and kidney. Human ortholog(s) of this gene implicated in 46 XX gonadal dysgenesis; ovarian dysgenesis 1; and ovarian hyperstimulation syndrome. Orthologous to human FSHR (follicle stimulating hormone receptor). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See fshr in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (24738966..24770184)
    105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (24617747..24648965)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene neurexin 1a Neighboring gene uncharacterized LOC137490446 Neighboring gene uncharacterized LOC137490445 Neighboring gene golgin subfamily A member 6-like protein 1 Neighboring gene forkhead box N2b

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables G protein-coupled peptide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables G protein-coupled receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables follicle-stimulating hormone receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables follicle-stimulating hormone receptor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein-hormone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables thyroid-stimulating hormone receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in basolateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in lateral plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    follicle-stimulating hormone receptor
    Names
    gonadotropic hormone I

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001001812.1NP_001001812.1  follicle-stimulating hormone receptor precursor

      See identical proteins and their annotated locations for NP_001001812.1

      Status: PROVISIONAL

      Source sequence(s)
      AY424301
      UniProtKB/TrEMBL
      Q6TCF9
      Related
      ENSDARP00000096529.4, ENSDART00000105751.5
      Conserved Domains (3) summary
      sd00033
      Location:79103
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00001
      Location:360607
      7tm_1; 7 transmembrane receptor (rhodopsin family)
      pfam13306
      Location:93224
      LRR_5; Leucine rich repeats (6 copies)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      24738966..24770184
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394844.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      77132..112371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)