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    si:ch211-132d3.4 si:ch211-132d3.4 [ Danio rerio (zebrafish) ]

    Gene ID: 323155, updated on 9-Dec-2024

    Summary

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    Official Symbol
    si:ch211-132d3.4provided by ZNC
    Official Full Name
    si:ch211-132d3.4provided by ZNC
    Primary source
    ZFIN:ZDB-LINCRNAG-141216-148
    See related
    Ensembl:ENSDARG00000101584 AllianceGenome:ZFIN:ZDB-LINCRNAG-141216-148
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb83d05; wu:fb83d05
    Summary
    Is expressed in central nervous system; diencephalon; and proliferative region. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See si:ch211-132d3.4 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (14353922..14381369, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496152 Neighboring gene uncharacterized LOC108190637 Neighboring gene microRNA 9-6 Neighboring gene transfer RNA arginine (anticodon UCG) Neighboring gene transfer RNA arginine (anticodon ACG)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007118.7 Chromosome 7 Reference GRCz11 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Transcriptional, post-transcriptional and chromatin-associated regulation of pri-miRNAs, pre-miRNAs and moRNAs. Nepal C, et al. Nucleic Acids Res, 2016 Apr 20. PMID 26673698, Free PMC Article
    2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_186720.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CU467822
      Related
      ENSDART00000161442.3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      14353922..14381369 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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