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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001114845.2 → NP_001108317.1 beta-hexosaminidase subunit beta isoform 1 precursor
See identical proteins and their annotated locations for NP_001108317.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
FP016255
- UniProtKB/TrEMBL
- A0A8M3AZK9, A0A8N7UYS4, A2BHD8
- Related
- ENSDARP00000050270.7, ENSDART00000050271.9
- Conserved Domains (2) summary
-
- cd06562
Location:182 → 523
- GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
- pfam14845
Location:37 → 160
- Glycohydro_20b2; beta-acetyl hexosaminidase like
-
NM_001309863.1 → NP_001296792.1 beta-hexosaminidase subunit beta isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks several exons and its 3' terminal exon extends past a splice site that is used in variant 1. This results in a novel 3' coding region and 3' UTR, compared to variant 1. It encodes isoform 2 which is shorter and has a distinct C-terminus, compared to isoform 1.
- Source sequence(s)
-
FP016255
- UniProtKB/TrEMBL
- A0A8M1P2A4, A0A8M3AZK9, F1QUU0
- Related
- ENSDARP00000088748.3, ENSDART00000097975.4
- Conserved Domains (2) summary
-
- pfam14845
Location:37 → 160
- Glycohydro_20b2; beta-acetyl hexosaminidase like
- cl02948
Location:182 → 456
- GH20_hexosaminidase; Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007116.7 Reference GRCz11 Primary Assembly
- Range
-
34600714..34616625 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005171791.5 → XP_005171848.1 beta-hexosaminidase subunit beta isoform X1
- UniProtKB/TrEMBL
- A0A8M2BJ34, A0A8M3B2G3
- Conserved Domains (2) summary
-
- cd06562
Location:182 → 524
- GH20_HexA_HexB-like; Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the ...
- pfam14845
Location:37 → 160
- Glycohydro_20b2; beta-acetyl hexosaminidase like