These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

1. NM_001386643.1 → NP_001373572.1  next to BRCA1 gene 1 protein

   Status: VALIDATED

   Source sequence(s)

   CT583642

   UniProtKB/TrEMBL

   A0A8M1QKU5, F1R2I7

   Related

   ENSDARP00000104318.2, ENSDART00000112742.3

   Conserved Domains (4) summary

   cd06396
   Location:5 → 85

   PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...

   cd14319
   Location:944 → 980

   UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins

   cd14947
   Location:363 → 470

   NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins

   cl00295
   Location:223 → 261

   ZZ; Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have ...

The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference GRCz11 Primary Assembly

Genomic

1. NC_007114.7 Reference GRCz11 Primary Assembly

   Range

   32933721..32952043

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_021474335.2 → XP_021330010.1  next to BRCA1 gene 1 protein isoform X1

   UniProtKB/TrEMBL

   A0A8M3B125, A0A8M9Q9K6

   Conserved Domains (3) summary

   cd06396
   Location:5 → 85

   PB1_NBR1; The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves ...

   cd14319
   Location:930 → 966

   UBA_NBR1; UBA domain of next to BRCA1 gene 1 protein (NBR1) and similar proteins

   cd14947
   Location:349 → 456

   NBR1_like; Functionally uncharacterized domain in neighbor of Brca1 Gene 1 and related proteins

Reference GRCz11 ALT_DRER_TU_2

Genomic

1. NW_018395227.1 Reference GRCz11 ALT_DRER_TU_2

   Range

   277510..297095

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)