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    si:ch211-161h7.5 si:ch211-161h7.5 [ Danio rerio (zebrafish) ]

    Gene ID: 569866, updated on 9-Dec-2024

    Summary

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    Official Symbol
    si:ch211-161h7.5provided by ZNC
    Official Full Name
    si:ch211-161h7.5provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091204-265
    See related
    Ensembl:ENSDARG00000093044 AllianceGenome:ZFIN:ZDB-GENE-091204-265
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See si:ch211-161h7.5 in Genome Data Viewer
    Location:
    chromosome: 24
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (20910084..20915071, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (20765468..20770843, complement)

    Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene vasoactive intestinal peptide receptor 1b Neighboring gene si:ch211-161h7.4 Neighboring gene cystatin 14a, tandem duplicate 1 Neighboring gene cystatin 14a, tandem duplicate 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein si:ch211-161h7.5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007135.7 Reference GRCz11 Primary Assembly

      Range
      20910084..20915071 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009297410.4 → XP_009295685.2  uncharacterized protein si:ch211-161h7.5

      UniProtKB/TrEMBL
      A0A8M2B9Q1, A0A8M3ANK0
      Related
      ENSDARP00000114560.1, ENSDART00000133763.2
    Nucleotide Protein Strain
    Heading Accession and Version

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