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    ndufa12 NADH:ubiquinone oxidoreductase subunit A12 [ Danio rerio (zebrafish) ]

    Gene ID: 556538, updated on 9-Dec-2024

    Summary

    Official Symbol
    ndufa12provided by ZNC
    Official Full Name
    NADH:ubiquinone oxidoreductase subunit A12provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050828-1
    See related
    Ensembl:ENSDARG00000042469 AllianceGenome:ZFIN:ZDB-GENE-050828-1
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:112053; si:dkey-183c16.3
    Summary
    Predicted to be involved in response to oxidative stress. Predicted to act upstream of or within mitochondrial respiratory chain complex I assembly. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex I. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 23. Orthologous to human NDUFA12 (NADH:ubiquinone oxidoreductase subunit A12). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See ndufa12 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (25828101..25836783, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (25838903..25847585, complement)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene laminin, beta 1b Neighboring gene transmembrane and coiled-coil domain family 3 Neighboring gene nuclear receptor subfamily 2, group C, member 1 Neighboring gene FYVE, RhoGEF and PH domain containing 6

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    General gene information

    Clone Names

    • MGC112053

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within mitochondrial respiratory chain complex I assembly IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in response to oxidative stress IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     
    part_of respiratory chain complex I IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
    Names
    NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12
    NP_001028275.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001033103.2NP_001028275.1  NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12

      See identical proteins and their annotated locations for NP_001028275.1

      Status: VALIDATED

      Source sequence(s)
      BX640593
      UniProtKB/TrEMBL
      A0A8M1N7Y0, Q498W6
      Related
      ENSDARP00000121890.1, ENSDART00000142491.2
      Conserved Domains (1) summary
      pfam05071
      Location:39138
      NDUFA12; NADH ubiquinone oxidoreductase subunit NDUFA12

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      25828101..25836783 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394556.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      312915..321597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)