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    mtfr1l mitochondrial fission regulator 1-like [ Danio rerio (zebrafish) ]

    Gene ID: 334296, updated on 9-Dec-2024

    Summary

    Official Symbol
    mtfr1lprovided by ZNC
    Official Full Name
    mitochondrial fission regulator 1-likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6228
    See related
    Ensembl:ENSDARG00000003940 AllianceGenome:ZFIN:ZDB-GENE-030131-6228
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fam54b; fi39f11; zgc:63922; wu:fi39f11
    Summary
    Predicted to be involved in aerobic respiration and mitochondrial fission. Predicted to be located in mitochondrial outer membrane. Predicted to be active in mitochondrion. Orthologous to human MTFR1L (mitochondrial fission regulator 1 like). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See mtfr1l in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (24718226..24727255)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (24699786..24708854)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene si:ch211-15d5.11 Neighboring gene selenoprotein N Neighboring gene transcription factor Adf-1 Neighboring gene SH3 and cysteine rich domain Neighboring gene granulysin

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in aerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitochondrial fission IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    mitochondrial fission regulator 1-like
    Names
    family with sequence similarity 54, member B
    protein FAM54B

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199884.1NP_956178.1  mitochondrial fission regulator 1-like

      See identical proteins and their annotated locations for NP_956178.1

      Status: PROVISIONAL

      Source sequence(s)
      BC053148
      UniProtKB/Swiss-Prot
      Q7T3E8
      Related
      ENSDARP00000018738.7, ENSDART00000007271.8
      Conserved Domains (1) summary
      pfam05308
      Location:10269
      Mito_fiss_reg; Mitochondrial fission regulator

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      24718226..24727255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005158494.5XP_005158551.1  mitochondrial fission regulator 1-like isoform X1

      See identical proteins and their annotated locations for XP_005158551.1

      UniProtKB/Swiss-Prot
      Q7T3E8
      Conserved Domains (1) summary
      pfam05308
      Location:10269
      Mito_fiss_reg; Mitochondrial fission regulator

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394990.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      280282..287757
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)