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    si:ch211-212k18.8 si:ch211-212k18.8 [ Danio rerio (zebrafish) ]

    Gene ID: 100001422, updated on 9-Dec-2024

    Summary

    Official Symbol
    si:ch211-212k18.8provided by ZNC
    Official Full Name
    si:ch211-212k18.8provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041111-14
    See related
    Ensembl:ENSDARG00000086421 AllianceGenome:ZFIN:ZDB-GENE-041111-14
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    im:7136729
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
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    Genomic context

    See si:ch211-212k18.8 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (19495905..19500326)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (19243883..19248375)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene si:ch211-212k18.6 Neighboring gene CD68 molecule Neighboring gene si:ch211-212k18.9 Neighboring gene mannosidase, alpha, class 2B, member 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC100001422

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001386716.1NP_001373645.1  uncharacterized protein LOC100001422 isoform 1

      Status: VALIDATED

      Source sequence(s)
      CR352328
      UniProtKB/TrEMBL
      A0A8M1PS59
      Related
      ENSDARP00000151038.1, ENSDART00000180514.1
    2. NM_001386717.1NP_001373646.1  uncharacterized protein LOC100001422 isoform 2

      Status: VALIDATED

      Source sequence(s)
      CR352328
      UniProtKB/TrEMBL
      A0A8M9QHJ9, E7EYY2
      Related
      ENSDARP00000104578.1, ENSDART00000125584.4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      19495905..19500326
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394683.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      218112..222533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)