U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    tpst1l tyrosylprotein sulfotransferase 1, like [ Danio rerio (zebrafish) ]

    Gene ID: 393171, updated on 9-Dec-2024

    Summary

    Official Symbol
    tpst1lprovided by ZNC
    Official Full Name
    tyrosylprotein sulfotransferase 1, likeprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040316-1
    See related
    Ensembl:ENSDARG00000044513 AllianceGenome:ZFIN:ZDB-GENE-040316-1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56162
    Summary
    Enables protein-tyrosine sulfotransferase activity. Predicted to act upstream of or within peptidyl-tyrosine sulfation. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See tpst1l in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (31232873..31241164, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (31196178..31204469, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene transfer RNA glutamic acid (anticodon CUC) Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene calcitonin gene-related peptide-receptor component protein Neighboring gene argininosuccinate lyase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Clone Names

    • MGC56162

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables protein-tyrosine sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein-tyrosine sulfotransferase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein-tyrosine sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within peptidyl-tyrosine sulfation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    tyrosylprotein sulfotransferase 1, like
    NP_956496.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200202.2NP_956496.1  tyrosylprotein sulfotransferase 1, like

      See identical proteins and their annotated locations for NP_956496.1

      Status: PROVISIONAL

      Source sequence(s)
      AF510737
      UniProtKB/TrEMBL
      A0A0R4IB97, A0A8N7XJI0, F6P0R5, Q7ZT02
      Related
      ENSDARP00000065364.3, ENSDART00000065365.5
      Conserved Domains (1) summary
      pfam13469
      Location:66254
      Sulfotransfer_3; Sulfotransferase family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      31232873..31241164 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)