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    si:ch211-236h17.3 si:ch211-236h17.3 [ Danio rerio (zebrafish) ]

    Gene ID: 565671, updated on 12-Sep-2024

    Summary

    Official Symbol
    si:ch211-236h17.3provided by ZNC
    Official Full Name
    si:ch211-236h17.3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-738
    See related
    Ensembl:ENSDARG00000004018
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
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    Genomic context

    See si:ch211-236h17.3 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (34990533..35026115)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (34891465..34927483)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489141 Neighboring gene uncharacterized LOC137489187 Neighboring gene solute carrier family 41 member 3 Neighboring gene Kruppel like factor 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables sulfotransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in proteoglycan biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    carbohydrate sulfotransferase 11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      34990533..35026115
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_688938.10XP_694030.1  carbohydrate sulfotransferase 11

      UniProtKB/TrEMBL
      A0A8N7UVE7, E7EXM4
      Related
      ENSDARP00000005165.7, ENSDART00000013449.8
      Conserved Domains (1) summary
      pfam03567
      Location:101331
      Sulfotransfer_2; Sulfotransferase family